Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma08g01142 ATGAAGCTATTTAGCTTTATCCTTTTATTGTTGTCATTACCTTTCTTCTCCGTTATGGCGGAGCTTCCTTCACAGGACATTTTAGCATTGTTGGAATTCAAGAAAGGCATCAAGCATGACCCTACTGGTTATGTCCTTAGTTCCTGGAATGAGGACTCTGTTGATGTTGATGGATGTCCATCTTCATGGAATGGAGTACTGTGTAATGGTAGTGATGTTGCTGGTATTGTACTTGATAACCTTGGTCTCGCCGCTGATGCCAACTTGAGTGTTTTCTCAAACCTCACAAAGCTAGTAAAACTCTCTATGTCCAACAATTCTATCTCAGGAAAACTTCCTGGCAACATTGCTGAATTCAAAAGCCTCGAGTTTCTGGATGTTTCTAATAATCTCTTTTCTTCATCCTTACCGGTGGGAATTGGCAAGTTATCTagcttgcagaatctttcattggctggaaataacttctctggctcaatacctgactctatttctggaatggcttcaatccaatctttggacttgagctgcaATTCATTTTCTGGACCACTGCTAGCATCATTGACTAAGCTGACTAACCTGGTATCATTTAATTTATCTCATAATTGCTTCACTGGAAAAATTCCCAAAGGTTTTGAGCTGATTTTTTCCCTTGAAAAGAttgacttgcatgggaatatgcttgagggtcatttagatgatgaattTATACTTTTTTCAAGTGCCAGCTATGTTGATTTTAGTGAGAATATGCTTGTGAGTTCTAATTCTCAGCAGCAGAAGTCTCTGCCACAATTATCTGAAAGTATTAAGTATTTGAATCTAAGCCATAACCGGCTAACTGGATCATTGGTTAGTGGAGGCAAGCAACCAAATTTTGAATACTTGAAGGTGTTAGACCTTAGTTACAATCAATTATCCGGAGAATTGCCTGAATTTGATTTTGTTTATGAACTCATGGTCCTTAAGCTCAGCAACAACAGATTTTCAGGATTTGTTCCCTCTGGTCTTCTTAAAGGAGACTCTTTGGTTTTAACTGAACTGGATTTGAGTGGCAACAATCTCTTAGGGCCAGTAAGTATAATTGCATCAACAACACTGTACTTTCTTAATCTGTCATCAAATGGGTTTACTGGTGAGCTGCCATTGCTTACTGGAAGCTGTGCTGTACTTGATTTGTCAAATAACAAATTAGAAGGAAATTTAACTAGGATGATGAAATGGGGGAATATTGAATTTCTTGATCTCAGTAGGAATCACTTGATAGGATCCATCCCCGAGGTAACTCAGTTTTTTCGATTAAATTATCTAAATCTTTCCCATAACTTTCTTAGCAGCTCCCTTCCAAAAGTCTTAACACAGTATCCAAAGCTTAGAATGCTTGATGTTAGTTCCAACCAGTTAGATGGGAAATTTCTAATTGATCTGGTCACAATGCCCACTTTGCAAGAGCTTCATCTTGGAAATAATACGATTTCTGGTGGCATTAGTTTATCATCCTTTCCTCCTCGTCCTTTCAATCTTCAGATTCTTGAACTTTCTTATAACCATTTTAATGGTTCTTTTCCTGCTGAGTTTGGGTCATTAACAGGCCTGAAAGTGCTCAATATTGCTGGAAATCATTTTTCTGGTTCTCTGCCAACCACAATTGCTAACATGAGTTCCCTAGATTCCTTGGATATATCAGAAAATAATTTTACAGGCCCTTTACCAAATAACATACCAAAGGGGCTAAAAAAATTCAATGCTTCAAACAATGATCTGTCTGGAGTTGTCCCAGAAAACCTTAGGAAGTTCCCTAGTTCTTCTTTCTATCCCGGTAATGATAGGTTGCATTTTCCAAACGACCCTTCTGGATCAACCAATAAATCTGATGAAAGTTCCAATAGGAAGTCTATCAGCTCTATTGTTAAAGTGATCATCATAGTATCATGTGTGGTTGCTGTTCTCTTCATGTTAGTACTGCTCGTTGTCATCATACACTACACTCGAATATCAAGATCTCCATCAGAATATGCTACTGCTAAGGATATGAGAGAGCATGCTCAACCACAAACCACTGGCCCTGGTCACGCAAAAGATTCGATTGGTGCTTTGGTTGTATCAGCCGAGGATTTTGTGACCTCACAGAAAGGTTCGTCATCTGAGATTATCAGCCATGATGAAAAAATGGCAGCTGCAACAAGGTTCTCCCCATCAAAAAATAGCCACTTTTCATCACCAGGATCTAGTGATTCAGTTTCTGTAGGAAATCATGCAAGACTATATGCAAGATCAGCAGATAAATTGACTGGAGAACTTTATTTTCTTGATGATGCAATAACATTGACACATGAGGAGCTGTCTGGAGCCccagctgaagttttggggagaagcagtcatggtaCATCTTACAAGGCAACTCTGGAGCATGGTTTGTTATTGAGAGTGAAGTGGCTAAGAGAAGGAATGGCAACAAAGAGAAAAGAATTTACCAAAGAGGCTAAAAAAATTGCAAACATCAGGCATCCCAATGTTGTGGGATTGAAAGGGTACTACTGGGGTCCTACTCAGCATGAGAAGCTTATTATTTCAGATTACATCTCTCCAGGAAGTCTTGCAAGTTTTCTTTACGATCGACCAGGACAAGAAGATCCACCATTGACTTGGGCTCTGAGACTAAAAATAGCAGTTGATATAGCACGTGGGCTGAACTATCTACACTTCGATCGTGCTGTTCCTCACGGCAACCTCAAAGCAACAAATGTGTTGTTAGATACATGTGACTTGCATGCACGTGTAGCTGATTACTGCCTTCACAAGCTTATGACTCAGGCTGGTACATTTGAACAAATGCTTGATGCTGGGGTCTTGGGATATCGCGCCCCAGAGCTTTCTGCTTCCAAGAAGCCAATGCCTTCCTTCAAATCAGATGTTTATGCTTTTGGGATTATACTTTTGGAACTTTTAACTGGAAGGTGTGCTGGTGATGTTGTGTCTGGCGAGAAGGAAGGTGTTGATCTGGCAAATTGGGTAAGGTTGCATGTTGCACAAGGTAGAGGATCAGAATGTTTTGATGATGCACTGGTGCAAGAAATAAGTAATTCAATTGTTGAAAAGGGAATGAATGAGGTTCTTGGAATAGCCATTCGATGCATAAGATCTGTTTCTGATAGGCCAGGTATCAGGACTATATATGAAGATCTTTCGTCTATATAG 3198 0.3734 MKLFSFILLLLSLPFFSVMAELPSQDILALLEFKKGIKHDPTGYVLSSWNEDSVDVDGCPSSWNGVLCNGSDVAGIVLDNLGLAADANLSVFSNLTKLVKLSMSNNSISGKLPGNIAEFKSLEFLDVSNNLFSSSLPVGIGKLSSLQNLSLAGNNFSGSIPDSISGMASIQSLDLSCNSFSGPLLASLTKLTNLVSFNLSHNCFTGKIPKGFELIFSLEKIDLHGNMLEGHLDDEFILFSSASYVDFSENMLVSSNSQQQKSLPQLSESIKYLNLSHNRLTGSLVSGGKQPNFEYLKVLDLSYNQLSGELPEFDFVYELMVLKLSNNRFSGFVPSGLLKGDSLVLTELDLSGNNLLGPVSIIASTTLYFLNLSSNGFTGELPLLTGSCAVLDLSNNKLEGNLTRMMKWGNIEFLDLSRNHLIGSIPEVTQFFRLNYLNLSHNFLSSSLPKVLTQYPKLRMLDVSSNQLDGKFLIDLVTMPTLQELHLGNNTISGGISLSSFPPRPFNLQILELSYNHFNGSFPAEFGSLTGLKVLNIAGNHFSGSLPTTIANMSSLDSLDISENNFTGPLPNNIPKGLKKFNASNNDLSGVVPENLRKFPSSSFYPGNDRLHFPNDPSGSTNKSDESSNRKSISSIVKVIIIVSCVVAVLFMLVLLVVIIHYTRISRSPSEYATAKDMREHAQPQTTGPGHAKDSIGALVVSAEDFVTSQKGSSSEIISHDEKMAAATRFSPSKNSHFSSPGSSDSVSVGNHARLYARSADKLTGELYFLDDAITLTHEELSGAPAEVLGRSSHGTSYKATLEHGLLLRVKWLREGMATKRKEFTKEAKKIANIRHPNVVGLKGYYWGPTQHEKLIISDYISPGSLASFLYDRPGQEDPPLTWALRLKIAVDIARGLNYLHFDRAVPHGNLKATNVLLDTCDLHARVADYCLHKLMTQAGTFEQMLDAGVLGYRAPELSASKKPMPSFKSDVYAFGIILLELLTGRCAGDVVSGEKEGVDLANWVRLHVAQGRGSECFDDALVQEISNSIVEKGMNEVLGIAIRCIRSVSDRPGIRTIYEDLSSI 1065
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma08g01142 1065 Gene3D Transferase(Phosphotransferase) domain 1 862 1065 - -
Gma08g01142 1065 PANTHER - 4 1065 - -
Gma08g01142 1065 Pfam Leucine rich repeat N-terminal domain 24 69 IPR013210 -
Gma08g01142 1065 Gene3D Ribonuclease Inhibitor 292 499 IPR032675 -
Gma08g01142 1065 SUPERFAMILY RNI-like 89 480 - -
Gma08g01142 1065 SUPERFAMILY L domain-like 434 601 - -
Gma08g01142 1065 SMART LRR_typ_2 553 577 IPR003591 -
Gma08g01142 1065 SMART LRR_typ_2 119 142 IPR003591 -
Gma08g01142 1065 SMART LRR_typ_2 479 508 IPR003591 -
Gma08g01142 1065 SMART LRR_typ_2 316 340 IPR003591 -
Gma08g01142 1065 SMART LRR_typ_2 191 214 IPR003591 -
Gma08g01142 1065 SMART LRR_typ_2 529 552 IPR003591 -
Gma08g01142 1065 SMART LRR_typ_2 143 167 IPR003591 -
Gma08g01142 1065 SMART LRR_typ_2 431 454 IPR003591 -
Gma08g01142 1065 PANTHER OS07G0626500 PROTEIN 4 1065 - -
Gma08g01142 1065 Pfam Leucine Rich repeat 345 359 IPR001611 GO:0005515
Gma08g01142 1065 Pfam Leucine Rich repeat 295 309 IPR001611 GO:0005515
Gma08g01142 1065 SUPERFAMILY Protein kinase-like (PK-like) 787 1061 IPR011009 -
Gma08g01142 1065 Pfam Leucine rich repeat 507 566 IPR001611 GO:0005515
Gma08g01142 1065 Gene3D Phosphorylase Kinase; domain 1 771 860 - -
Gma08g01142 1065 ProSiteProfiles Protein kinase domain profile. 783 1065 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma08g01142 1065 Gene3D Ribonuclease Inhibitor 23 291 IPR032675 -
Gma08g01142 1065 Pfam Protein tyrosine and serine/threonine kinase 787 985 IPR001245 GO:0004672|GO:0006468
Gma08g01142 1065 Gene3D Ribonuclease Inhibitor 500 615 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma08g01142 Gma-Chr8 9642472 9646620 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma08g01142 26 1065 Receptor kinase-like Gene Family AT3G28040 31.163 5.97e-93 317
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Gma08g01142 PK_Tyr_Ser-Thr 2.5e-28 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma08g01142 - - gmx:100777862 2018.43
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma08g01142 08 9642472 9646620 Gma08g01142 08 9642472 9646620 ECH