Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma08g01140 ATGCATAGAGGCCTTGCTTCAATCATTACTGGCATCCGGGAAATGGGTTCTCGTTTGAGCAAAGCACGTGGTTCTCTCAAAAATGAATCAGAAGGAACATCCTCGGGAAAAAATGAAGTTTCATACGAGGAGCTGTCTAGATTGATGAGGATAAGGGATTTGATGAGCCTATTGTTGACTTATCCAATGAAAATGGACGAGGGAGGTAAATTAAAATCCTGCATTAGTGCATTTCCTGAATGGAAAGCTCAGTTATTGTCCACTGATCATGATACTATTGTGATGGACAAACCATGGCGTGTACTAACTGAGAAGGCACTGGGATGTATGAAGGGATTTATGCCCACGGAAATAATAAGTAAAATAGAAAGTGGTGAGAGATCCATCTTCAACCATAATGATGCCGATGCAATACCAAAAGCCATTCTCCACCTAACTGTTGATCTCGCAGTTAACCAACTAATTCAAACTTTGTTTTCTGGAGATTACTATGCACGCTATATCAGTCTGTCATCCAGAAACTTGGCTGAAAAAAGATCTGTAGTGAACAAAATAGAAGCAGCCTTTGAAGAGAAGCACAATATGTTTGGAATCGACAAAGATTTTCTTAGTGCCCTGTGGATCAATTCCTCAACATATAAGACTGATGCAGAGATTCGAGTTCAAGAAGAGATCAATAACAAGATGGCAGCAGGTTTTTCGGAGACAAAAGGGGGTGAGGAAAAAATGAATAGGCATTTGGTGATTGTAGTGGATGCAGACAGCAACAAGAAGCTGGACCTTCACAAAGTGCGTTTTCCTACTGGAGTTGTGGTGGTGTTGATAACAACTGAGCTGAAGGATGATGACTTCAGAATCACAAGCATGATGGATTTGAATATAAGGACCCAGGATCATTTGTTGCCTTGGGAACTCTTTTGCAGCTATGTGGGCAGTAGCAAGGTATGCTCATCACTGGTCATTCAGAGAATTGCAGTGCAAATTGTTAAGGAATGTCATGGCCATCTTCTTGCCGTTGTCCTTGTGGCAAACTACCTGAAGAATGTGGAAGATGTTAAACAGTGGCAAGTTGCACTTGACAAATTAAGCAGCAGCCTGAATCCTTCCTATGATTATAGAGATAGTGACGGAATTGGCATTAGTAGGGTCATGGTCAATGCATTTGTAGATATTATTTGGGAAGACATTGATGATACACAAAAGCTTTGCCTTGAACTAAGTTTGTCTGTTCACAACATTAAAATTGGGAAGCGACTTGCTATCTTAGTGTCTGATTGGGCCGATATTTTATCAGGACATACACAAGAAATGAAACTGAATTCAAATGAATTTGGTGAATACATAAGGCATATCAGAGTGCTTCTAGACCGTTTTGTCTTTTTGAAAATTGAAAGGGGAGATGTCTATTTGCCTGTAGAAACCTATGATATAATAAAATCATTACACACCTTGAATCCTTCCATCATAAGGCATGATGCATTAGGGTTTCTGGAGCCACCCTGCATTGAACGATGGCACAACCTTATTCGGATAGAATTGATGGACGACAAAATATGTGAGCTACCAGAATCACCAGAATGCCCTAAACTCAGAGTGCTCCTGTTGCAGGGTAATGTTGATTTGATGGATATCCCTGACTCATTTTTCGAGCACATGCCTTTGCTACAACAGTTGGACTTATCCTACACTAGTATAAGGGATTTGCCCTCTTCTGTCTCCAAATTAACACAACTTAAGAAATTTTATCTTAGAGGTTGTGATCTCTTCATGGAACTACCACCACAAATTGGACTACTAAAAAATCTTGAAGAGCTTGATCTTGATGGGACTTTGATAACCCATCTACCTAAAGAGATCCGAGAATTGATCAACTTGCGAAGCTTAACCCTTTGCTTTGATGGATACCATCATGTACTTGGTCATGGCAATAAAGGCAAGCAAATTTCCAACTCAACAATTATTCCTACGGGACTGATATCAAATCTTACTCAGTTGAATTATTTAAACATCAAAGTTGACCCTGAAGATGAGCGATGGAATGATAATGTTAATATTGTTTTTGTGGAAATTATTGGATTAAAGAGGTTGGAGACAGTGAGTATATATATCCCAAAGGCTAACCTTTTGAAATTGATACCTGTCCACAAATCCCTCAATTTCAGATTGGTTGTTGGTAATCATATGCGACGTTTCATATCGCGTGTGACACCTGAACTGGAGGAAAAATTCAAACGTTGTGACTATAGTATAAAGTTTGTTAATGGTGTAAATGTTCCAAACGTAGTGAAGATGACGCTTGGAAACTTCAAGGCCTTATACCTAGACCGACATATGACCATCAAGAGTCTCTCTGATTTTGAGTTGAGGAATTTATCTGGGTTGCAAATATGTGTATTGGCGGAATGTAATCAAATGGAAACAATTGTGGATAGAAGTTATTTACATGATGGGCCTGCTCTTCCAAATTTGGAGTTTTTGAGCGTATTCTATATGAAAAACTTAAAAAGCCTTTGTGAAAGGCCTAACCCCTCTTTTCTCCGCTTGAAGTCTATAGCATTGCACACTTGCCCCATGTTAACTACAGTTTTTACCGAAGATTCTCTTAAGGACCTTTCCTTATTGGAGGAGATTATTATTGAAGACTGTCCAAAAGTAACCACCCTTATACGCCATGACTCATCAGAAATAAAAACACGGTTCACAATGCCCAAGTTGAGAAAGATATCTCTTCTCTATCTTCCTGAATTGGTCAACATTTTTAATGGCCTGCATGTTGAACATGATGTAGAAAAAATGGTATTTTATTATTGTCCTAAACTCCAAAGTCTTTCACAATGGGAGTTGTCAAAGGCATCTGTGAAGATCATCATAGGAGAAAGCGTGTGGTGGGAAGCATTGAAATGGAATGCAGCAGAGTGGGGAGATGCTGGTCGACCCAATGTTTTTGAACGAATTTTTTCACCAATCAGTGAGGAGGCTGACATCATGACTCAACTGGCTGCACATCAAGAGACTCAATTAAGTACAGATCACGATGAGTTTCTGGGAACCAAACAAAGGCATGATGATAGTAAGTTACCATCAAATCCTGAAGAAGTAGAAGACCTACGGCGTGACTCAGCTGCAAATCCTTTGATTGCATTCACTTATGATGAGTTAAAGATTATCACAGAAAATTTTAGGCAAGATCGTGTGTTGGGGGGAGTAGGATTTGGAAGGGTTTACAAAGGATTCATTTCTGAGGAGTTAATAAGGAAAGGGCTTCCAACACTTGATGTAGCTGTTAAGGTTCATGATGGTGACAACAGTCATCAAGGGCACAGAGAATGGCTGTCGCAAGTCGAATTTTGGGGGCAGCTTTCACATCCAAATCTAGTCAAAGTAATTGGGTACTGTTGCGAAGACAACCATAGGGTACTAATATATGAGTACATGTCCCGGGGAGGTCTGGACAACTATTTGTTCAAATATGCACCTGCCATACCACCATTGTCCTGGTCCATGAGAATGAAGATTGCATTTGGCGCTGCAAAGGGACTTGCATTTCTTCATGAAGCAGAGAAAACTGTCATCTATCGATGTTTCAAGACATCAAATATTTTATTGGACCAGgagtacaattcaaaactttccgactttggccttgctaagtttggaccagttggagacaaatcccatgtttctactcgagtaatgggaacatatggttatgccgcacctgaataCTTAGCGACAGGTCATCTGTATATCaaaagtgatgtttacagttttggtgttgttcttcttgaacttctcactggaagaagatccTTAGACACGACATTTGATGGAGAGCAGAAACTTGCAGAATGGGCTCATTCTTTGCTGAAGGAAAAGAAGAAACTTCTAAAAATCATAGATCCAAGGTTGGATGGTGATTATCCAATTAAAGCAGTTCACAAGGCTGCAATGCTTGCATATCATTGCTTGAACCGCGACCCGAAAGCAAGGCCTCTAATGCGAGAAATTGTACATTCATTGGAGCCTTTGCAGGCACACACAGAGGCACCTATTGGAAAAAAACGTTGA 4068 0.3825 MHRGLASIITGIREMGSRLSKARGSLKNESEGTSSGKNEVSYEELSRLMRIRDLMSLLLTYPMKMDEGGKLKSCISAFPEWKAQLLSTDHDTIVMDKPWRVLTEKALGCMKGFMPTEIISKIESGERSIFNHNDADAIPKAILHLTVDLAVNQLIQTLFSGDYYARYISLSSRNLAEKRSVVNKIEAAFEEKHNMFGIDKDFLSALWINSSTYKTDAEIRVQEEINNKMAAGFSETKGGEEKMNRHLVIVVDADSNKKLDLHKVRFPTGVVVVLITTELKDDDFRITSMMDLNIRTQDHLLPWELFCSYVGSSKVCSSLVIQRIAVQIVKECHGHLLAVVLVANYLKNVEDVKQWQVALDKLSSSLNPSYDYRDSDGIGISRVMVNAFVDIIWEDIDDTQKLCLELSLSVHNIKIGKRLAILVSDWADILSGHTQEMKLNSNEFGEYIRHIRVLLDRFVFLKIERGDVYLPVETYDIIKSLHTLNPSIIRHDALGFLEPPCIERWHNLIRIELMDDKICELPESPECPKLRVLLLQGNVDLMDIPDSFFEHMPLLQQLDLSYTSIRDLPSSVSKLTQLKKFYLRGCDLFMELPPQIGLLKNLEELDLDGTLITHLPKEIRELINLRSLTLCFDGYHHVLGHGNKGKQISNSTIIPTGLISNLTQLNYLNIKVDPEDERWNDNVNIVFVEIIGLKRLETVSIYIPKANLLKLIPVHKSLNFRLVVGNHMRRFISRVTPELEEKFKRCDYSIKFVNGVNVPNVVKMTLGNFKALYLDRHMTIKSLSDFELRNLSGLQICVLAECNQMETIVDRSYLHDGPALPNLEFLSVFYMKNLKSLCERPNPSFLRLKSIALHTCPMLTTVFTEDSLKDLSLLEEIIIEDCPKVTTLIRHDSSEIKTRFTMPKLRKISLLYLPELVNIFNGLHVEHDVEKMVFYYCPKLQSLSQWELSKASVKIIIGESVWWEALKWNAAEWGDAGRPNVFERIFSPISEEADIMTQLAAHQETQLSTDHDEFLGTKQRHDDSKLPSNPEEVEDLRRDSAANPLIAFTYDELKIITENFRQDRVLGGVGFGRVYKGFISEELIRKGLPTLDVAVKVHDGDNSHQGHREWLSQVEFWGQLSHPNLVKVIGYCCEDNHRVLIYEYMSRGGLDNYLFKYAPAIPPLSWSMRMKIAFGAAKGLAFLHEAEKTVIYRCFKTSNILLDQEYNSKLSDFGLAKFGPVGDKSHVSTRVMGTYGYAAPEYLATGHLYIKSDVYSFGVVLLELLTGRRSLDTTFDGEQKLAEWAHSLLKEKKKLLKIIDPRLDGDYPIKAVHKAAMLAYHCLNRDPKARPLMREIVHSLEPLQAHTEAPIGKKR 1355
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma08g01140 1355 Gene3D Transferase(Phosphotransferase) domain 1 1145 1353 - -
Gma08g01140 1355 Gene3D Ribonuclease Inhibitor 425 741 IPR032675 -
Gma08g01140 1355 SUPERFAMILY L domain-like 492 944 - -
Gma08g01140 1355 Pfam Protein tyrosine and serine/threonine kinase 1062 1340 IPR001245 GO:0004672|GO:0006468
Gma08g01140 1355 SUPERFAMILY Protein kinase-like (PK-like) 1036 1340 IPR011009 -
Gma08g01140 1355 Gene3D Phosphorylase Kinase; domain 1 1023 1144 - -
Gma08g01140 1355 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 244 404 IPR027417 -
Gma08g01140 1355 Pfam Leucine rich repeat 528 588 IPR001611 GO:0005515
Gma08g01140 1355 Gene3D - 302 374 IPR042197 -
Gma08g01140 1355 SMART LRR_typ_2 599 622 IPR003591 -
Gma08g01140 1355 SMART LRR_typ_2 552 575 IPR003591 -
Gma08g01140 1355 MobiDBLite consensus disorder prediction 20 39 - -
Gma08g01140 1355 Pfam NB-ARC domain 247 366 IPR002182 GO:0043531
Gma08g01140 1355 PANTHER OS01G0588500 PROTEIN-RELATED 1004 1354 - -
Gma08g01140 1355 Gene3D Ribonuclease Inhibitor 758 956 IPR032675 -
Gma08g01140 1355 ProSiteProfiles Protein kinase domain profile. 1060 1344 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma08g01140 1355 PANTHER SERINE/THREONINE-PROTEIN KINASE PBL16-RELATED 1004 1354 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma08g01140 Gma-Chr8 9628226 9636161 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma08g01140 1020 1340 Glycoside Hydrolase AT3G07070 48.485 9.12e-90 295
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Gma08g01140 PK_Tyr_Ser-Thr 5.7e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma08g01140 - - gmx:102668266 2699.46
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma08g01140 08 9628226 9636161 Gma08g01140 08 9628226 9636161 ECH