Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma08g01116 ATGCCCCGTAAAGTAaattacggactcgattacgacgacgattactatgatgatgattatgatgactatgcttatgatgatgttgatgcagaagactatgGAGGACCTGATACAAAGCAAGAGACCATTAAGCCTGGCCTTTGGCAATGCTCCATTTGCACTTATGACAACGATGAGAGTATGACTTTTTGTGATATTTGTGGTGTTGTACGCCGTCCCTTGGTTAATACTGGAACTTCCAACAGTAACAAAACAGATCCTTTCAAGTTCAATGTTCCATCCCCCGACGATGTGGTTTATACTGGCCTACGTTCTTCCAAAACGGGTTTGAAAGACAAAGCTACAAACTCTAATTCTCAGCTTTCATCAAGCACCAGAGAGAAGAATGAACTTTCTGTACAGTCAAATGCTGAAAGTTCAGACAACTTATCATCCTTAATGCAAAAGAGCAGACAGGATAGTTCAACTGAGAGCAAGCTTTCCAAAAAAGTAGCAATTGATCTGCAAACAAGTGGTAAAACTTCAAACAGCTTGCCGGAATCTTTGTCAAAAGACAAAGATAACAATATTAATAAAATAAATTCTTCGAAAAATGGTACAATTGATATTCAATCAAGCAAAGAAAAGTCAGGTAGTTTGTCTACACGGTCAAAAGTCAAGGAAAGTGATAACATCAGTTCCTCTTCTATCAAAGATGGAAAACCTGAAAGTATTTCCAGCAGTTTCAGCAACATGGTTGTCGATGTAAGATTTGGAAATTCTGATAACACTAATGCTAAAGGAACTCACTCACGTGTTTCTTATAAGCCAGAAAAATGGATGCTCCCTGAACAAGCTGAAGATACATTGACTCAGCTGAATCTTGCAATTGTTGGCCATGTTGATTCTGGAAAATCAACTCTATCTGGTAGGTTACTGCACCTATTGGGACGGATCTCCCAGAAAGAAATGCACAAATATGAAAAGGAGGCCAAGTTACAGGGCAAGGGATCCTTTGCTTATGCTTGGGCACTTGATGAAAGTTCTGAAGAAAGAGAACGGGGAATAACTATGACAGTGGCTGTTGCTTATTTTGACACGATGAGATATCATGTTGTTGTGCTCGATTCCCCTGGCCATAAAGATTTTGTCCCAAACATGATTTCTGGGGCAACACAAGCTGATGCTGCAATTCTTGTTATAGATGCCTCACTTGGTTCATTTGAAGCTGGTATGGATGGCAGCAAAGGGCAAACAAGGGAGCATGCACAACTTATCAGAAGCTTTGGTGTTGACCGGGTTATAGTTGCTGTAAATAAGATGGATGCTGTTGCGTACTCCCAAGATCGATTTGATTTTATAAGGCAGCAGCTGGGAGTTTTTCTCCACTTTTGTGGTTTCAAAGATTCTTCTCTATCTTGGATTCCCATGAGTGCCATGGAAAATCAAAATTTGGTGGCATCCCCTTCTGATGCTCGTTTAAAAAACTGGTATGGTGGACCTTATCTATTAGATGCAATTGACTCTCTCCAACCTCCTACTAGAGAATTCTCAAAACCTCTACTAATGCCAATATGTGATGTCATCAAATCAACTACACTTGGACAGGTTTCTGCCTCTGGTAAACTAGAAGCAGGAGCTCTTCGGAGTGGATCAAAGGTCTTGGTTATGCCTTCAGCTGTTGTGGGAACAGTACGCTCATTGGAGCGTGACTCTAATGCTTGTACTGTTGCAAGAGCTGGAGATAATGTAGCTGTAACGTTGCAAGGTGTGGATGGAAATCATGTGATGGCAGGAGATGTACTATGCCATCCTGACTTTCCTGTTGCAGTTGCTAAGCATTTGGAGTTGAAAGTGCTAGTGTTGGATGGTGCAAGTCCCATATTGGTGGGCACACAGTTAGAGTTTCACATACACCATGCAAAGGAACCTGGCAGAGTTTCAAGAATATTATCAGTACTTGATCCCAAGACGGGTAAGGTGACCAAAAAGTCACCTCGCTGTCTCTCTGCAAAGCAAAGTGCAGTAATTGAGGTGATTTTGAATGAGACAGTCTGTGTGGTAGAGTTCTCTAGTTGTAAAGCTCTTGGAAGGGTATCCCTAAGATCAATGGGAAGAACGATTGCTGTTGGAGTTGTGACAAGAATAATTGAAGAACAAGGTTAA 2145 0.3972 MPRKVNYGLDYDDDYYDDDYDDYAYDDVDAEDYGGPDTKQETIKPGLWQCSICTYDNDESMTFCDICGVVRRPLVNTGTSNSNKTDPFKFNVPSPDDVVYTGLRSSKTGLKDKATNSNSQLSSSTREKNELSVQSNAESSDNLSSLMQKSRQDSSTESKLSKKVAIDLQTSGKTSNSLPESLSKDKDNNINKINSSKNGTIDIQSSKEKSGSLSTRSKVKESDNISSSSIKDGKPESISSSFSNMVVDVRFGNSDNTNAKGTHSRVSYKPEKWMLPEQAEDTLTQLNLAIVGHVDSGKSTLSGRLLHLLGRISQKEMHKYEKEAKLQGKGSFAYAWALDESSEERERGITMTVAVAYFDTMRYHVVVLDSPGHKDFVPNMISGATQADAAILVIDASLGSFEAGMDGSKGQTREHAQLIRSFGVDRVIVAVNKMDAVAYSQDRFDFIRQQLGVFLHFCGFKDSSLSWIPMSAMENQNLVASPSDARLKNWYGGPYLLDAIDSLQPPTREFSKPLLMPICDVIKSTTLGQVSASGKLEAGALRSGSKVLVMPSAVVGTVRSLERDSNACTVARAGDNVAVTLQGVDGNHVMAGDVLCHPDFPVAVAKHLELKVLVLDGASPILVGTQLEFHIHHAKEPGRVSRILSVLDPKTGKVTKKSPRCLSAKQSAVIEVILNETVCVVEFSSCKALGRVSLRSMGRTIAVGVVTRIIEEQG 714
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma08g01116 714 MobiDBLite consensus disorder prediction 77 96 - -
Gma08g01116 714 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 285 528 IPR027417 -
Gma08g01116 714 MobiDBLite consensus disorder prediction 108 154 - -
Gma08g01116 714 Pfam Elongation factor Tu GTP binding domain 286 502 IPR000795 GO:0003924|GO:0005525
Gma08g01116 714 CDD HBS1-like_II 513 597 - -
Gma08g01116 714 Pfam Elongation factor Tu C-terminal domain 602 709 IPR004160 -
Gma08g01116 714 Pfam Elongation factor Tu domain 2 532 596 IPR004161 GO:0005525
Gma08g01116 714 SUPERFAMILY EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain 606 710 IPR009001 -
Gma08g01116 714 SUPERFAMILY Ran binding protein zinc finger-like 46 71 IPR036443 -
Gma08g01116 714 PRINTS GTP-binding elongation factor signature 287 300 IPR000795 GO:0003924|GO:0005525
Gma08g01116 714 PRINTS GTP-binding elongation factor signature 346 354 IPR000795 GO:0003924|GO:0005525
Gma08g01116 714 PRINTS GTP-binding elongation factor signature 366 376 IPR000795 GO:0003924|GO:0005525
Gma08g01116 714 PRINTS GTP-binding elongation factor signature 382 393 IPR000795 GO:0003924|GO:0005525
Gma08g01116 714 PRINTS GTP-binding elongation factor signature 427 436 IPR000795 GO:0003924|GO:0005525
Gma08g01116 714 Gene3D - 274 507 IPR027417 -
Gma08g01116 714 Gene3D Translation factors 604 713 - -
Gma08g01116 714 MobiDBLite consensus disorder prediction 104 238 - -
Gma08g01116 714 PANTHER OS04G0595300 PROTEIN 110 712 - -
Gma08g01116 714 SMART zf_4 46 70 IPR001876 -
Gma08g01116 714 PANTHER TRANSLATION FACTOR 110 712 - -
Gma08g01116 714 Gene3D Translation factors 511 600 - -
Gma08g01116 714 CDD EF1_alpha 287 506 - -
Gma08g01116 714 ProSiteProfiles Translational (tr)-type guanine nucleotide-binding (G) domain profile. 283 514 IPR000795 GO:0003924|GO:0005525
Gma08g01116 714 ProSitePatterns Zinc finger RanBP2-type signature. 48 67 IPR001876 -
Gma08g01116 714 SUPERFAMILY Translation proteins 505 600 IPR009000 -
Gma08g01116 714 Gene3D - 40 82 - -
Gma08g01116 714 MobiDBLite consensus disorder prediction 192 238 - -
Gma08g01116 714 MobiDBLite consensus disorder prediction 161 184 - -
Gma08g01116 714 CDD HBS1_C_III 601 709 - -
Gma08g01116 714 ProSiteProfiles Zinc finger RanBP2 type profile. 44 73 IPR001876 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma08g01116 Gma-Chr8 9481926 9489261 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma08g01116 46 712 Eukaryotic Initiation Factors Gene Family AT5G10630 60.720 0.0 804
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma08g01116 K14416 - gmx:100798594 1354.35
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma05g01632 05 38077121 38084640 Gma08g01116 08 9481926 9489261 GST
Gma15g00890 15 7404993 7408112 Gma08g01116 08 9481926 9489261 PCT
Gma13g01922 13 34508104 34511233 Gma08g01116 08 9481926 9489261 PCT