Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma08g01113 ATGCCAGGGAACAATTTTAACTGCGTCCCTTTAACACCAAGGTCTAGATTGGAAAGGCTTCTGAGGGAAAGAGAGCTAAGGAAATCCTTCAAGCTTGTTCAACCGACCGAGGAAGCAAGAGATGGCAGCAAAGAGGGAGAACAATTTTATGGTGATTCATACATAAGTGAGAATGAAATTTCAGGTAATCATAAAGAGGAAGAGGTCACGGAAACGAATGCGGATGCAAGAGGTTTTACAGGCAAACAACGCTTGTTGGTGGTAGCTAACAGGTTGCCTGTGTCTGCTGTTAGGGAGGGTGTGGAGTCATATCGCCTTGATATCAGTGTAGGAGGGCTAGTCAGTGCACTTCTAGGCAAGAAAATTTTTGAATTTGATACCAGATGGATTGGGTGGGCTGGTGTGAATGTGCCTGATGATGTTGGGCAGAGAGCATTGACAAAAGCTTTAGCTGAAATGCGATGCATACCAGTATTTCTTGATGAGGAGATAGTTAATCAATACTATAATGGCTACTGCAACAACATCTTATGGCCTCTATTTCATTACCTTGGGCTTCCACAAGAAGATAGACTTGCTACAACTCGTACTTTCCAATCCCAATTTGATGCATATAAGAAGGCAAACCAAATGTTTGCTGATGTAGTAAATAAGCATTATGAGGAAGGAGATGTTGTTTGGTGCCATGATTACCACCTAATGTTCCTTCCAAAATGTTTAAAACAATACAATGACAAAATGAAAGTTGGTTGGTTTCTCCATACACCCTTTCCTTCCTCAGAAATACATAGGACTCTACCGTCCAGATCAGAGCTGTTGAGATCTGTACTTGCAGCTGACCTGGTGGGATTCCATACCTATGATTATGCCAGGCATTTTGTTAGCGCTTGTACTCGTATTCTTGGGCTTGAGGGAACACCTGAAGGAGTAGAAGATCATGGGAAACTGACCCGTGTGGCTGCGTTTCCTATTGGGATTGACTCTGATAGATTCACTCAAGCCCTTGAACTCCCTGAAGTCCAGGAACACATGAAAGAACTAAAAGAAAGATTTGCAGGCCGAAAGGTAATGTTGGGTGTCGATCGTCTTGATATGATAAAAGGAATTCCCCAAAAAATCTTGGCATTTGAAAAGTTCCTTGAGGAGAATTCACACTGGCGTGATAAAGTTGTCTTGCTACAAATTGCTGTACCTACTAGGAAAGATGTTCCGGAATATCAAAAGCTTACAAGCCAAGTGCATGAGATTGTAGGACGCATCAATGGAAGATTTGGTACACTTACAGCTGTTCCAATACACCATCTGGATCGGTCACTTGACTTTCATGAATTATGTGCACTCTATGCTGTAACTGATGTAGCACTTGTTACATCTTTAAGGGATGGAATGAATCTTGTCAGCTATGAATTTGTTGCGTGCCAAGCATCCAAGAAAGGGGTTCTCATTTTAAGTGAGTTTGCAGGAGCAGCACAGTCTCTTGGTGCTGGTGCTATCTTGGTAAACCCATGGAACATCACAGAGATAGCTGCTTCTATTGGTTATGCGTTGGAAATGTCAGCTGATGAAAGAGAAAAACGACATCAGTTTAATTTCAAACATGTGAAGACTCACACGTCACAGGAATGGGCTGCAACTTTTGTGAGTGAACTTAATGATACCATTGTTGAAGCTCAGCTTAGGACAAGACAAGTTCCTCCATTACTTCCCAACAAAGTGGCAGTTGATTGTTACTCAAAATCCAATAACCGATTAATCATACTGGGTTTCAATGCCACTTTGAATGAACCAGTGGATGCCCTTGGAAGGGCTGGTCAAATTAGAGAATTGGAACATAAATTACACTCAAATACGAAGGAACCTTTAAAGAAGTTATCCGATGATCCAAAAACAACAATAGTAGTTCTGAGTGGGAGCGGCCGAGCTGTCCTGGACAAAAACTTCAGTGAATTTAACATGTGGTTGGCAGCAGAAAATGGGATCTTTTTGCGACATACTTCAAGTGAGTGGATGACAACCATGCCTGAAAATTTAAACATGGATTGGGTTGATAGCGTGAAGCATGTTTTTGAGTATTTTACTGAAAGAACTCCAAGGTCTCATTTTGAGCTTCGGGAGATGTCAATAGTATGGAATTACAAGTATGCAGATGTTGAGTTTGGAAGGATTCAAGCAAGAGATCTGCTTCAACATCTGTGGGCAGGGCCAATATCAAATGCATCTCTTGATGTTGTCCAAGGTGGTCGATCTGTTGAGGTCCGCACAATTGGCGTGTCAAAGGGAGCAGCTATTGATCGTATCCTTGGAGAGATAGTTCATAAAAAAGGCATGAAGAcaccaattgactatgtcctatgcgttggccactttctagccaagGATGAAGATGTGTATCAATTTTTTGAGCCAGAGCTACCATCTGAATCACCTCCAGTACCAAGAGCTATGCTATCCAAATCCAATTCTTACAGGCCATCATCTCTGTCAAAATTACCAGCCACCACCAAAACCAGTTCGAAGGCAGCTCAATACAAGAAACAACGTTCGTTGTCAAACATAGAAAAGAGAGAACTTGATCAATGGAGACCAATGTGTGGTGATAAAATAGCACTGCATGAGGGTTCCTCAGTGCTTGATTTAAAAGGTGATAATTACTTCTCTTGTGTTGTTGGACGGAAAAGATCAAGTGCACGTTACCttcttaaaacctcagatgatgttgtcaacctcttacgtgacttggcagaacATTCTTCTTCACCAACTTAA 2766 0.4024 MPGNNFNCVPLTPRSRLERLLRERELRKSFKLVQPTEEARDGSKEGEQFYGDSYISENEISGNHKEEEVTETNADARGFTGKQRLLVVANRLPVSAVREGVESYRLDISVGGLVSALLGKKIFEFDTRWIGWAGVNVPDDVGQRALTKALAEMRCIPVFLDEEIVNQYYNGYCNNILWPLFHYLGLPQEDRLATTRTFQSQFDAYKKANQMFADVVNKHYEEGDVVWCHDYHLMFLPKCLKQYNDKMKVGWFLHTPFPSSEIHRTLPSRSELLRSVLAADLVGFHTYDYARHFVSACTRILGLEGTPEGVEDHGKLTRVAAFPIGIDSDRFTQALELPEVQEHMKELKERFAGRKVMLGVDRLDMIKGIPQKILAFEKFLEENSHWRDKVVLLQIAVPTRKDVPEYQKLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFHELCALYAVTDVALVTSLRDGMNLVSYEFVACQASKKGVLILSEFAGAAQSLGAGAILVNPWNITEIAASIGYALEMSADEREKRHQFNFKHVKTHTSQEWAATFVSELNDTIVEAQLRTRQVPPLLPNKVAVDCYSKSNNRLIILGFNATLNEPVDALGRAGQIRELEHKLHSNTKEPLKKLSDDPKTTIVVLSGSGRAVLDKNFSEFNMWLAAENGIFLRHTSSEWMTTMPENLNMDWVDSVKHVFEYFTERTPRSHFELREMSIVWNYKYADVEFGRIQARDLLQHLWAGPISNASLDVVQGGRSVEVRTIGVSKGAAIDRILGEIVHKKGMKTPIDYVLCVGHFLAKDEDVYQFFEPELPSESPPVPRAMLSKSNSYRPSSLSKLPATTKTSSKAAQYKKQRSLSNIEKRELDQWRPMCGDKIALHEGSSVLDLKGDNYFSCVVGRKRSSARYLLKTSDDVVNLLRDLAEHSSSPT 921
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma08g01113 921 MobiDBLite consensus disorder prediction 813 842 - -
Gma08g01113 921 Gene3D Glycogen Phosphorylase B; 77 332 - -
Gma08g01113 921 PANTHER BNAA02G18920D PROTEIN 49 913 - -
Gma08g01113 921 MobiDBLite consensus disorder prediction 804 842 - -
Gma08g01113 921 SUPERFAMILY HAD-like 610 912 IPR036412 -
Gma08g01113 921 PANTHER TREHALOSE-6-PHOSPHATE SYNTHASE 49 913 IPR001830 GO:0003824|GO:0005992
Gma08g01113 921 Pfam Trehalose-phosphatase 609 809 IPR003337 GO:0003824|GO:0005992
Gma08g01113 921 CDD HAD_TPP 584 803 - -
Gma08g01113 921 Gene3D - 675 755 - -
Gma08g01113 921 Pfam Glycosyltransferase family 20 84 551 IPR001830 GO:0003824|GO:0005992
Gma08g01113 921 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 83 554 - -
Gma08g01113 921 CDD GT20_TPS 84 551 IPR001830 GO:0003824|GO:0005992
Gma08g01113 921 Gene3D - 611 769 IPR023214 -
Gma08g01113 921 TIGRFAM trehalose_OtsA: alpha,alpha-trehalose-phosphate synthase (UDP-forming) 84 551 IPR012766 GO:0003825|GO:0005992
Gma08g01113 921 Gene3D Glycogen Phosphorylase B; 333 536 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma08g01113 Gma-Chr8 9460863 9468920 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma08g01113 1 920 Trehalose Biosynthesis Gene Families AT1G78580 73.214 0.0 1377
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma08g01113 K16055 - gmx:100797533 1816.2
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma08g01113 08 9460863 9468920 Gma08g01113 08 9460863 9468920 ECH
Gma05g01630 05 38057983 38066801 Gma08g01113 08 9460863 9468920 GST