Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma08g01105 ATGGCTGATTATTCAGCAGGAACTGAATCCCAGGAGGTGGTCGTAAATGTAACCAAGAACACCTCCGAAACAATCCAACGCTCAGACTCCCTTGTCTCTGTTCCTTTCTTGCAGAAGTTGGTAGCTGAGGCGGTGGGAACATATTTCCTGATATTTGCAGGGTGTGCTTCATTGGTGGTGAACGAGAACTACTACAACATGATAACATTTCCTGGGATAGCAATTGTTTGGGGTCTGGTTCTGACGGTGTTGGTTTACACTGTCGGTCACATCTCTGGTGGCCATTTCAATCCTGCTGTCACCATTGCTTTTGCCTCCACCAGAAGATTCCCCTTGATCCAGGTACCAGCTTATGTAGTAGCTCAACTCCTAGGAAGCATACTTGCAAGTGGAACTCTGAGACTATTATTTATGGGGAATCATGACCAGTTTTCAGGAACAGTCCCAAATGGGACTAACCTGCAGGCTTTTGTGTTTGAATTCATAATGACCTTTTTCCTCATGTTCGTCATATGCGGGGTTGCCACCGATAACAGAGCGGTTGGTGAGTTGGCTGGGATTGCAATTGGGTCGACATTACTGCTGAATGTGATTATTGGAGGGCCAGTGACAGGAGCATCAATGAACCCAGCTAGAAGCCTAGGACCTGCTTTTGTACACGGTGAATACGAAGGAATATGGATATATTTGTTGGCACCTGTTGTGGGGGCCATAGCTGGAGCATGGGTATACAACATCGTTAGGTACACAGACAAGCCATTGAGTGAGATCACCAAGAGTGCTTCTTTCCTCAAAGGCCGTGCTGCCTCCAAATAA 816 0.4669 MADYSAGTESQEVVVNVTKNTSETIQRSDSLVSVPFLQKLVAEAVGTYFLIFAGCASLVVNENYYNMITFPGIAIVWGLVLTVLVYTVGHISGGHFNPAVTIAFASTRRFPLIQVPAYVVAQLLGSILASGTLRLLFMGNHDQFSGTVPNGTNLQAFVFEFIMTFFLMFVICGVATDNRAVGELAGIAIGSTLLLNVIIGGPVTGASMNPARSLGPAFVHGEYEGIWIYLLAPVVGAIAGAWVYNIVRYTDKPLSEITKSASFLKGRAASK 271
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma08g01105 271 CDD MIP 38 247 IPR000425 GO:0015267|GO:0016020|GO:0055085
Gma08g01105 271 SUPERFAMILY Aquaporin-like 31 257 IPR023271 -
Gma08g01105 271 PANTHER NODULIN-26 1 269 - -
Gma08g01105 271 PRINTS Major intrinsic protein family signature 38 57 IPR000425 GO:0015267|GO:0016020|GO:0055085
Gma08g01105 271 PRINTS Major intrinsic protein family signature 77 101 IPR000425 GO:0015267|GO:0016020|GO:0055085
Gma08g01105 271 PRINTS Major intrinsic protein family signature 114 133 IPR000425 GO:0015267|GO:0016020|GO:0055085
Gma08g01105 271 PRINTS Major intrinsic protein family signature 159 177 IPR000425 GO:0015267|GO:0016020|GO:0055085
Gma08g01105 271 PRINTS Major intrinsic protein family signature 190 212 IPR000425 GO:0015267|GO:0016020|GO:0055085
Gma08g01105 271 PRINTS Major intrinsic protein family signature 227 247 IPR000425 GO:0015267|GO:0016020|GO:0055085
Gma08g01105 271 Gene3D Glycerol uptake facilitator protein. 2 259 IPR023271 -
Gma08g01105 271 PANTHER AQUAPORIN NIP2-1 1 269 IPR034294 -
Gma08g01105 271 Pfam Major intrinsic protein 31 244 IPR000425 GO:0015267|GO:0016020|GO:0055085
Gma08g01105 271 ProSitePatterns MIP family signature. 95 103 IPR022357 -
Gma08g01105 271 TIGRFAM MIP: MIP family channel proteins 42 244 IPR000425 GO:0015267|GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma08g01105 Gma-Chr8 9382362 9385912 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma08g01105 1 270 Major Intrinsic Protein MIP AT5G37810 53.237 2.56e-101 295
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma08g01105 K09874 - gmx:547904 521.546
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma05g01618 05 37954406 37958729 Gma08g01105 08 9382362 9385912 GST
Gma08g01105 08 9382362 9385912 Gma13g01988 13 35165009 35167514 PCT
Gma13g01988 13 35165009 35167514 Gma08g01105 08 9382362 9385912 PCT