Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma08g01102 ATGAAGTGGGGTGGGAAAAAACCTTCTCTTTCTTCTTCTTCTTCTAGGCCTTCTTCTTTCATATCTCATGTATCTCCTTTTTCATGGCTTTCCAAGTTCAAGCAGATGAGAATCAACTCAGAGCAGCCAAAACCTGGCACGCTGAAGCAGAATGCAAGGCATAATTCAACTCCATCTAATAATATTTCACCCCATTATGCTGATATAAATAGAGGCAGGTTTTATGGAGGGGATGATGATGAGGCTTTCTGGAGACTCTCATTTGGTGAAGAGGATGGTAATGAGCATAGGAAAAGTGAAGAAGATATTCTGAAAGTGAAACCAGTAAAGTACAATTTGGATGTTGAACATGCCATTCCATCCTCAAGCGGACTGAATAATGCTAAGAGAAAAGGTAGTAGAAAAGAAGGCACTCAGAAGATGAAGCAGAAGGACACTACTGGAATGAGAGAAGAAACGAAAATTCTGAATGAAGCACCAAAGAGTGTGAAGGAACTAGAATCCTTAAGGAGGAGATATGAGAGGAAAGCACAAAGAGTTTTGCAAGAGCAGCTCTTGAAACTGGAAAAGGCAGAAGAGGAAGCTGAGTTTGCATCAAGTCCATTCTTGGAAAATGATGTGCTGCAGTTTGAGTCACCAAGAACAATTTGCACACCAAGAAAGCATTTTTTTGTAGATTCAAAGGGTTCTGGCCTTGAAAGTTTCAGAGAAGCTCGTGTGTGTAGTCCTCAATTGTGTTCTGAGTGGCATAATTTGAAACAAAGTGAGGGGTTGAAATTGAAACCAAAGAGTAGCCAACAAAGGCAATCTCTTCATGTTAGCAGAGAAAACCAGAGGAGGAAACCAAAGCACAACAACAAGGTTAGAGTGTATTCTCCAAGGATGGGTTCCAAGGTCGAAGTCCGCAAAATAAAGGCCATGGAAGAGAAGAAGAAAGCAAAACTGAAGATGAAGAAAGAAGAGGAAATTGTGGAGGAAACAGAAGAAGGGTTAGATAGCTTTGCTGTGGTGAAATGTTCTTTGGATCCACAGAAGGATTTCAGAGATTCAATGATTGAGATGATCACAGAGAAACAGATCAGCGAGCCAGAAGAAATGGAAGATCTGTTAGCATGCTATCTGACTTTGAATTCCAGTGAGTACCATGATCTCATCATCCAAGTGTTCAAGCAAGTATGGTTGTGTATGAGCCAAGCCAGTTCGTGTATTCAATCAGACAAGCAATGTTGTTGTTGTGATTAA 1242 0.4066 MKWGGKKPSLSSSSSRPSSFISHVSPFSWLSKFKQMRINSEQPKPGTLKQNARHNSTPSNNISPHYADINRGRFYGGDDDEAFWRLSFGEEDGNEHRKSEEDILKVKPVKYNLDVEHAIPSSSGLNNAKRKGSRKEGTQKMKQKDTTGMREETKILNEAPKSVKELESLRRRYERKAQRVLQEQLLKLEKAEEEAEFASSPFLENDVLQFESPRTICTPRKHFFVDSKGSGLESFREARVCSPQLCSEWHNLKQSEGLKLKPKSSQQRQSLHVSRENQRRKPKHNNKVRVYSPRMGSKVEVRKIKAMEEKKKAKLKMKKEEEIVEETEEGLDSFAVVKCSLDPQKDFRDSMIEMITEKQISEPEEMEDLLACYLTLNSSEYHDLIIQVFKQVWLCMSQASSCIQSDKQCCCCD 413
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma08g01102 413 MobiDBLite consensus disorder prediction 117 151 - -
Gma08g01102 413 MobiDBLite consensus disorder prediction 258 272 - -
Gma08g01102 413 MobiDBLite consensus disorder prediction 129 151 - -
Gma08g01102 413 TIGRFAM A_thal_3678: uncharacterized plant-specific domain TIGR01568 335 396 IPR006458 -
Gma08g01102 413 MobiDBLite consensus disorder prediction 35 66 - -
Gma08g01102 413 MobiDBLite consensus disorder prediction 35 68 - -
Gma08g01102 413 ProSiteProfiles OVATE domain profile. 336 395 IPR006458 -
Gma08g01102 413 MobiDBLite consensus disorder prediction 7 22 - -
Gma08g01102 413 Pfam Transcriptional repressor, ovate 340 396 IPR006458 -
Gma08g01102 413 MobiDBLite consensus disorder prediction 257 286 - -
Gma08g01102 413 PANTHER TRANSCRIPTION REPRESSOR OFP4 10 409 - -
Gma08g01102 413 MobiDBLite consensus disorder prediction 1 22 - -
Gma08g01102 413 Coils Coil 303 330 - -
Gma08g01102 413 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 10 409 IPR038933 GO:0045892
Gma08g01102 413 Coils Coil 163 194 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma08g01102 Gma-Chr8 9356527 9357768 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Gma08g01102 Ovate 6.9e-24 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma08g01102 - - gmx:100794362 756.518
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma08g01102 08 9356527 9357768 Gma08g01102 08 9356527 9357768 ECH
Gma05g01615 05 37923906 37925027 Gma08g01102 08 9356527 9357768 GST
Gma08g01102 08 9356527 9357768 Gma15g00814 15 6708982 6711202 PCT
Gma08g01102 08 9356527 9357768 Gma13g01996 13 35231669 35232913 PCT
Gma15g00814 15 6708982 6711202 Gma08g01102 08 9356527 9357768 PCT
Gma13g01996 13 35231669 35232913 Gma08g01102 08 9356527 9357768 PCT