Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma08g01088 ATGGATAGTAAGTTCAGAAAAAACAACCGCAACTCATATACCAGTGAACAAGATCAAGACACTGATCATGATGTAGCTCAAGAAAACATTGCCGAGTCCCCTCCTTCTTCCACTGTGTTCAACATCGATGGCTTAGTCCCATCCCCCACCCCTTCATCAAAGAGAAGGAGGGCAATACAGAAAAGGGTGGTGCAAATCCCAATGAAGGAGACAGAAGGGTGTAGGCTAAAAGGAGAGAGCAACACCCCACCCTCGGATTCATGGGCTTGGAGAAAGTATGGACAGAAACCCATCAAGGGTTCCCCTTATCCCAGAGGGTACTACAGGTGTAGCAGTTCCAAGGGCTGTCCGGCACGGAAACAAGTGGAAAGGAGCTGCGTGGACCCCACAATGCTAGTCGTCACTTACTCCTCCGACCACAACCATCCATGGCCACCTTCTAGAAACCACGCCAGGCCCACCAAGAAGCCTGAACCGGTTCCGGACCCGGTCCAACCCGAACCGGAGGAGAAGTTCGCGGACCTGGGCGGGGACGACTCCATGATAACCACCGCGGAGGAATTGGGCTGGCTGGGGGAGATGGAAACGACGTCATCCACGGTGCTCGAAAGCCCCATTATGGCCACGGGCTACCACGCTGACGTGGCGCTGATTCCGATGAGGGAGGAGGACGAGTCGCTCTTCGCCGACCTCGGGGAGCTGCCGGAGTGCTCGGTGGTATTCAGGCAGGGGCTGCTGACGGAGCGGCGGCGGTACACCGCGCCGTGGTGCGGGACCACAAGTTGA 786 0.5662 MDSKFRKNNRNSYTSEQDQDTDHDVAQENIAESPPSSTVFNIDGLVPSPTPSSKRRRAIQKRVVQIPMKETEGCRLKGESNTPPSDSWAWRKYGQKPIKGSPYPRGYYRCSSSKGCPARKQVERSCVDPTMLVVTYSSDHNHPWPPSRNHARPTKKPEPVPDPVQPEPEEKFADLGGDDSMITTAEELGWLGEMETTSSTVLESPIMATGYHADVALIPMREEDESLFADLGELPECSVVFRQGLLTERRRYTAPWCGTTS 261
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma08g01088 261 MobiDBLite consensus disorder prediction 151 176 - -
Gma08g01088 261 Pfam WRKY DNA -binding domain 86 143 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gma08g01088 261 ProSiteProfiles WRKY domain profile. 85 145 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gma08g01088 261 MobiDBLite consensus disorder prediction 137 177 - -
Gma08g01088 261 MobiDBLite consensus disorder prediction 1 95 - -
Gma08g01088 261 MobiDBLite consensus disorder prediction 30 48 - -
Gma08g01088 261 MobiDBLite consensus disorder prediction 1 27 - -
Gma08g01088 261 PANTHER OS01G0750100 PROTEIN 19 259 - -
Gma08g01088 261 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 19 259 IPR044810 GO:0003700
Gma08g01088 261 Gene3D WRKY domain 73 146 IPR036576 GO:0003700|GO:0006355|GO:0043565
Gma08g01088 261 SUPERFAMILY WRKY DNA-binding domain 82 145 IPR036576 GO:0003700|GO:0006355|GO:0043565
Gma08g01088 261 SMART WRKY_cls 84 144 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma08g01088 Gma-Chr8 9264190 9265955 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma08g01088 22 243 WRKY Transcription Factor Family AT1G29280 58.650 1.46e-80 241
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Gma08g01088 WRKY 5.6e-25 CL0274
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma08g01088 08 9264190 9265955 Gma08g01088 08 9264190 9265955 ECH
Gma05g01603 05 37839368 37842373 Gma08g01088 08 9264190 9265955 GST