Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma08g01083 ATGAAGAATTGCGATGAATGGAAACCTTTCCTAGTAATGATAGCAATAGATTTTTCTTTAACCATGGTGAACATTCTTCTCAAGAAAGTCCTTCAAGAAGGAATGAACCATTTGGTTTTTATCACATATCGTCTCTCAGTTGCTACTATATTTCTGGCCCCCATCGGCTACTTTAAGGAAAGAAATGGAAGACCACAGCTCACATTTCAAATTTTATGCTGCCTTTTCTTCAGTGCCATTATTGGGGCATCCGTCACACAATACTTCTTCCTTCTGGGGATCCAATACACCTCAGCCACCTTTGCTTGTGCCTTTGTTAATATGGTCCCGGTGATCACATTCATTATGGCATTACCATTTGGATTAGAAACTGTGAACATTAAATGCAAAGGTGGGAAAGCGAAGATTCTTGGTACATTTGTGTGCATAGGAGGGGCATTGTTGTTGACACTTTACAAAGGAAAACCCTTGTTTGATGGGTCTCACTATCAATCTGCAATGGACCAAGCTTCTTCTACTACTAGATCAACACAGAAATGGACCATCGGTGTAATAGCTTTGATTATGGGAACCCTTTTTTGGTCTTTTTGGTTTATTTTACAGTCAAAGATAGGGAAGAGATATCCTTGCCAGTATTCAAGCACAGCCATCATGACCTTCTTTGGAGCCATGCAAGCAGCTATTCTTGGTTTCTCCACTGGCAGCAGCAACTTGTCCTCGTGGGTTCTCAAGGATAAGATACAAATAATCACCGTTCTTTATTCTGGGATAGTTGGGTCAAGTGTGTGCTATGTGGGCATGTCATGGTGCGTAAAGAAGAGGGGTCCGGTCTTTACTGCTGCATTCAGCCCTCTTGTTCAGATAATGTCGGGCATGATTGATATCCCCTTCTTGCACGAGCAGCTTCATCTTGGAAGTGTGGTGGGATCCATGTTGGTGATGATCGGGTTGTACATTCTTCTGTGGGGCAAAAGCAAGGATATGATGCAGAATAATGGCGCCACTAAGTTCGCCCAAGAAGTTGAAGAAACCAAGGAACAGGAGCCGCAAGTATAA 1056 0.4261 MKNCDEWKPFLVMIAIDFSLTMVNILLKKVLQEGMNHLVFITYRLSVATIFLAPIGYFKERNGRPQLTFQILCCLFFSAIIGASVTQYFFLLGIQYTSATFACAFVNMVPVITFIMALPFGLETVNIKCKGGKAKILGTFVCIGGALLLTLYKGKPLFDGSHYQSAMDQASSTTRSTQKWTIGVIALIMGTLFWSFWFILQSKIGKRYPCQYSSTAIMTFFGAMQAAILGFSTGSSNLSSWVLKDKIQIITVLYSGIVGSSVCYVGMSWCVKKRGPVFTAAFSPLVQIMSGMIDIPFLHEQLHLGSVVGSMLVMIGLYILLWGKSKDMMQNNGATKFAQEVEETKEQEPQV 351
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma08g01083 351 PANTHER WAT1-RELATED PROTEIN 9 347 - -
Gma08g01083 351 SUPERFAMILY Multidrug resistance efflux transporter EmrE 43 153 - -
Gma08g01083 351 SUPERFAMILY Multidrug resistance efflux transporter EmrE 245 325 - -
Gma08g01083 351 Pfam EamA-like transporter family 182 321 IPR000620 GO:0016020|GO:0016021
Gma08g01083 351 Pfam EamA-like transporter family 24 150 IPR000620 GO:0016020|GO:0016021
Gma08g01083 351 PANTHER WAT1-RELATED PROTEIN 9 347 IPR030184 GO:0016021|GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma08g01083 Gma-Chr8 9205320 9207879 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma08g01083 5 328 Nodulin-like Gene Family AT1G11460 38.462 5.83e-89 269
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma08g01083 - - gmx:100813873 704.901
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma05g01598 05 37763651 37766144 Gma08g01083 08 9205320 9207879 GST
Gma08g01083 08 9205320 9207879 Gma13g02007 13 35343634 35357223 PCT
Gma13g02007 13 35343634 35357223 Gma08g01083 08 9205320 9207879 PCT