Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma08g01079 ATGTCAGATCACAACCACGAGATATCCACTTCCGCTGATGATGGTAATGATTCTCTGAATGGTCACATCATATCTACTACAGTTGGAGGAAAAAATGGGAAGCCCAAACAGACTAAAAGTTATATAGCAGAACGCATTGTGGGGACTGGGTCATTTGGAATTGTCTTCCTGGCTAAATGCTTGGAAACTGGCGAGCCAGTGGCCATTAAGAAGGTTTTACAGGACAAAAGATATAAAAATCGTGAGCTACAGTTAATGCGCTTGATGGACCATCCAAATGTGATCTCTCTGAAGCATCGTTTCTTTTCCACTACAAGTGCAGATGAACTTTTTCTTAATTTGGTGATGGAATATGTTCCAGAGTCTATGTATCGAGTCTCAAAGTTCTATAGTAATACTAATCAGAGCATGCCACTTATCTATGTAAAACTTTACATGCACCAGATTTTCAGTGGGCTGGCTTATATCCACACTGTTCCTGGAGTTTGCCACAGAGATTTGAAGCCTCAAAATATACTGGTTGACCCTCTTACACACCAGGTTAAGATATGTGATTTTGGGAGTGCAAAAGTGCTGGTCAAAGGAAAAGCTAATATATCACACATATGTTCACTTTTCTATCGGGCACCGGAACTTATGTTTGGTGCCACTGAGTATACTACTTCAATTGATATTTGGTCAGCTGGCTGTGTCCTTGCTGAGCTGCTTTTGGGCCAGCCCTTATTTCCTGGCGAAAATGCAGTGGACCAGCTTGTAGAGATTATCAAGGTTCTTGGCACACCCGCTCAGGAGGAAGTTTCCTGTACGAATCCAAACTACAATGATTTCAAGTTTCCACAGATATTCCATGAAAAAATGCCTCCAGAAGCAATAGATCTTGCTTCCCGGCTTCTGCAGTATTCCCCAAGTCTTCGATGTACTGCGCTAGAAGCATGTGCTCACCCATTCTTTGATGAACTCCGTGAACCCAATGCTCACTTGCCAGATGGTCGTCCATTTCCCCCTCTATTCAACTTAAAACAAGAGTTATCTGGAGCATCTCCAGAACTTATTGATAAGTTGATACCTGACCATGTGAAGCGGCAGATAGGGCTACAACATGCCCATTTGGCTGGATTTCTGGAACATGATGTTAAGCTCGGCAAATTGTAG 1152 0.4262 MSDHNHEISTSADDGNDSLNGHIISTTVGGKNGKPKQTKSYIAERIVGTGSFGIVFLAKCLETGEPVAIKKVLQDKRYKNRELQLMRLMDHPNVISLKHRFFSTTSADELFLNLVMEYVPESMYRVSKFYSNTNQSMPLIYVKLYMHQIFSGLAYIHTVPGVCHRDLKPQNILVDPLTHQVKICDFGSAKVLVKGKANISHICSLFYRAPELMFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPAQEEVSCTNPNYNDFKFPQIFHEKMPPEAIDLASRLLQYSPSLRCTALEACAHPFFDELREPNAHLPDGRPFPPLFNLKQELSGASPELIDKLIPDHVKRQIGLQHAHLAGFLEHDVKLGKL 383
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma08g01079 383 Gene3D Transferase(Phosphotransferase) domain 1 121 360 - -
Gma08g01079 383 ProSitePatterns Serine/Threonine protein kinases active-site signature. 162 174 IPR008271 GO:0004672|GO:0006468
Gma08g01079 383 CDD STKc_GSK3 36 320 IPR039192 -
Gma08g01079 383 PANTHER SHAGGY-RELATED PROTEIN KINASE ETA 4 367 - -
Gma08g01079 383 Pfam Protein kinase domain 43 317 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma08g01079 383 Gene3D Phosphorylase Kinase; domain 1 26 120 - -
Gma08g01079 383 SMART serkin_6 41 317 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma08g01079 383 ProSiteProfiles Protein kinase domain profile. 41 317 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma08g01079 383 MobiDBLite consensus disorder prediction 1 36 - -
Gma08g01079 383 SUPERFAMILY Protein kinase-like (PK-like) 36 341 IPR011009 -
Gma08g01079 383 PANTHER GLYCOGEN SYNTHASE KINASE-3 ALPHA 4 367 - -
Gma08g01079 383 MobiDBLite consensus disorder prediction 12 34 - -
Gma08g01079 383 ProSitePatterns Protein kinases ATP-binding region signature. 47 71 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma08g01079 Gma-Chr8 9163693 9168010 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma08g01079 47 325 Core Cell Cycle Gene Families AT1G76540 34.014 3.17e-54 180
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_GSK Gma08g01079 Pkinase 2.2e-62 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma08g01079 K14502 - gmx:100812801 781.171
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma08g01079 08 9163693 9168010 Gma08g01079 08 9163693 9168010 ECH
Gma05g01595 05 37718048 37721965 Gma08g01079 08 9163693 9168010 ECH
Gma05g01595 05 37718048 37721965 Gma08g01079 08 9163693 9168010 GST
Gma08g01079 08 9163693 9168010 Gma13g02016 13 35428816 35432669 PCT
Gma15g00798 15 6557035 6561533 Gma08g01079 08 9163693 9168010 PCT