Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma08g01077 ATGAAGCCCTTCTGCAGATTCTTGATTCTTGTATCGCTATTTTCTCTGGTGGAATCTTCATGCAACAGCAGTGAAGAGCATGACTTGGTGTCCAAGGCTTTCAAATCAGTCTCTGGCTTCAACGCTTTCTCCTCCTCGTTCCCAACCAACAACTGTTCACAAACTCACATCATCACCAGCATAGTACTTCCATCCCAAAACCTCAGCGGCACAATTTCATGGAACTACCTTAGGAACATATCCAACTTGCAGATTCTCGATCTCTCCGGGAATTTCCTACAGGGCCACGTGCCAAGCTGGTTTTGGTCGAGTTCATCCTTATTGGCAATAAACCTCTCTAGAAATAGGTTCGGAGGGAGCATCCTTCAACCCACATCAGAAAACACCTCGTTTTCATCCATTCAATCCCTCAACCTCTCATACAATAGGTTTACCAACTCAATCCAGCTTTCTGGTTTCAAAAACCTTAAAATCCTCGACCTTTCCCACAACAACCTCGTAACACTCCCTTCCGGGTTTCAAAACCTCAGCAACCTACAACACATCGACCTCTCAAGCTGCAATCTTCAAAGCAACGTAAAACCCATTTCCGCTCTTCACTCACTTCACTACTTGGACTTATCAAACAACACCTTCACGGGTAATTTCCCTTATGATTTCCCTCCACTCACCACCCTCAAGTTCCTCAACATCTCGTTCAACAACTTCACCTCAGCAATTAGCGTAAACAAGTTCAGTAGATTCTTCGGTAAATCAGCTTTCGTCCACGCTGGCAGCAACTTCACCTACACCAACGACAGTAATAAAAACACAAAACAAGAAGCCATCATCGAAAAGAAACAAAAGAAGCGAAAGTCCAAAACGCTGATTGGTGCAGCGTCGTCTGCGGCATCAGCAATTGTCCTAATTCTCTTGGGCATATGGGCAGTCCGCATTGTGATTCAGAAGAGGAAGCAACGTGCCAAGAAGAACAAGTGGGCGATTTCGATGCCGGTCCCACAAGGGATGATGATGATGATGAAATCAGGGCCGTTCGAGTTCGAGACAGAATCGGGGTCAACGTGGGTGGCTGACCTGAAGGAAGCGTCTTCGGCGGCGGTGGTGATGTTCGAGAAGCCGTTGATGAATCTGAGCTTCAAGGACCTCATTGTTGCAACGTCACACTTCGGGAAGGAGTCGCTTCTAGCGGAGGGAAGGTGTGGGCCAGTGTATAGGGCAGTGCTACCCGGGGACCTCCACGTGGCAATCAAGGTCCTGGAAGAGGCCAGAGACGTTGATCCTGATGACTCCGTGGCCACCTTCGTTGACCTCTCGAGACTCAAGCATCCCAACCTGCTGCCCCTCTCCGGTTACTGCATTGCAGGTAAGGAGAAACTGGTGCTGTACGAGTACATGGCAAACGGCGACCTAGGAAGGTGGCTACACGAGCTTCCGACTGGAGACACCAACGTGGAGGACTGGACAGGCGACACGTGGGAGATTCAAAACGGCGTCGTCGACGACGGATCCCCAGAAAAGATGGGATGGCTCACACGACACCGTATCGCGGTGGGCATAGCGCGTGGCCTCGCGTACCTTCACCACGCGCGTTCCAAGCCCGTGGTGCACGGCCACCTCGTCACCTCCAACATCCTCCTCGCCGACGACTTCGAGCCCCGCATCGCCGATTTCGGGTTGCGACCCGACCCGGATCCGAATTTCGGCACGGAGACCGACGTCTACTGCTTCGGGGCGGCTCTGGTGGAGCTCCTGACGGGGAAGGGGAGCACGGCGGAGGCGGTGGCAGCGGCACGGAAGGCGATGAGGGAGGGGCACGGCGTTAGGGTTTTGGACGAGAGGCTCCGACTCGGGGGTGACTCGGTGGTACTGAGTCAGATGGTGGAGACTCTCCGAGTCGCGTTTTTGTGTACTGCTGAATGCCCTTCGAAGAGGCCCACAATGCAACAGGTTTTGGGTTTGCTCAAAGACATTCGTCCTCATCACCAACACCAACACCAACTCGTCCTGAGTTGA 2013 0.5236 MKPFCRFLILVSLFSLVESSCNSSEEHDLVSKAFKSVSGFNAFSSSFPTNNCSQTHIITSIVLPSQNLSGTISWNYLRNISNLQILDLSGNFLQGHVPSWFWSSSSLLAINLSRNRFGGSILQPTSENTSFSSIQSLNLSYNRFTNSIQLSGFKNLKILDLSHNNLVTLPSGFQNLSNLQHIDLSSCNLQSNVKPISALHSLHYLDLSNNTFTGNFPYDFPPLTTLKFLNISFNNFTSAISVNKFSRFFGKSAFVHAGSNFTYTNDSNKNTKQEAIIEKKQKKRKSKTLIGAASSAASAIVLILLGIWAVRIVIQKRKQRAKKNKWAISMPVPQGMMMMMKSGPFEFETESGSTWVADLKEASSAAVVMFEKPLMNLSFKDLIVATSHFGKESLLAEGRCGPVYRAVLPGDLHVAIKVLEEARDVDPDDSVATFVDLSRLKHPNLLPLSGYCIAGKEKLVLYEYMANGDLGRWLHELPTGDTNVEDWTGDTWEIQNGVVDDGSPEKMGWLTRHRIAVGIARGLAYLHHARSKPVVHGHLVTSNILLADDFEPRIADFGLRPDPDPNFGTETDVYCFGAALVELLTGKGSTAEAVAAARKAMREGHGVRVLDERLRLGGDSVVLSQMVETLRVAFLCTAECPSKRPTMQQVLGLLKDIRPHHQHQHQLVLS 670
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma08g01077 670 Gene3D Ribonuclease Inhibitor 21 127 IPR032675 -
Gma08g01077 670 SUPERFAMILY Protein kinase-like (PK-like) 379 661 IPR011009 -
Gma08g01077 670 Gene3D Ribonuclease Inhibitor 128 253 IPR032675 -
Gma08g01077 670 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 3 662 - -
Gma08g01077 670 ProSiteProfiles Protein kinase domain profile. 389 668 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma08g01077 670 SUPERFAMILY L domain-like 46 240 - -
Gma08g01077 670 Gene3D Transferase(Phosphotransferase) domain 1 565 668 - -
Gma08g01077 670 Gene3D Transferase(Phosphotransferase) domain 1 465 564 - -
Gma08g01077 670 Pfam Leucine rich repeat 133 189 IPR001611 GO:0005515
Gma08g01077 670 Pfam Protein tyrosine and serine/threonine kinase 393 560 IPR001245 GO:0004672|GO:0006468
Gma08g01077 670 Gene3D Phosphorylase Kinase; domain 1 349 464 - -
Gma08g01077 670 PANTHER KINASE, PUTATIVE-RELATED 3 662 - -
Gma08g01077 670 ProSiteProfiles Leucine-rich repeat profile. 155 177 IPR001611 GO:0005515
Gma08g01077 670 Pfam Leucine Rich Repeat 82 101 IPR001611 GO:0005515
Gma08g01077 670 SMART LRR_typ_2 80 103 IPR003591 -
Gma08g01077 670 SMART LRR_typ_2 153 175 IPR003591 -
Gma08g01077 670 SMART LRR_typ_2 199 222 IPR003591 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma08g01077 Gma-Chr8 9145360 9148459 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma08g01077 40 657 Receptor kinase-like Gene Family AT5G07280 31.118 7.74e-72 251
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VII-2 Gma08g01077 PK_Tyr_Ser-Thr 9.2e-21 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma08g01077 - - gmx:100788556 1300.8
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma08g01077 08 9145360 9148459 Gma08g01077 08 9145360 9148459 ECH
Gma05g01594 05 37703855 37706930 Gma08g01077 08 9145360 9148459 GST
Gma08g01077 08 9145360 9148459 Gma15g00795 15 6538636 6541542 PCT
Gma08g01077 08 9145360 9148459 Gma13g02018 13 35446930 35449723 PCT
Gma15g00795 15 6538636 6541542 Gma08g01077 08 9145360 9148459 PCT
Gma13g02018 13 35446930 35449723 Gma08g01077 08 9145360 9148459 PCT