Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma08g01074 ATGTCAGAAGAATATGAGAGGAGTGAGGAACATGCTGATGATGACTCTTCAATGGGATCATCCCAGAAATGCTCATCCTTTGATTTGAATGAAGAAGCTAGTAGTGAAGATAACAATGACAACGATGAGGGGTATGATGAGGAAGCAAAAGACGAAGGTACTTCAACTAATAAAAGTAGCAGCATAACGAAGGAAGGAAGTAATGAACGAAGAGGTGGCGTGAGACAATATGTTAGATCAAAGATGCCTCGGCTCCGGTGGACACCTGAACTTCATCTATCCTTTGTACATGCTGTTGAAAGGCTTGGTGGTCAAGAAAGAGCAACACCCAAATTGGTGCTTCAGCTAATGAATGTGAGAGGCCTCAGCATTGCTCATGTCAAGAGTCACTTGCAGATGTATCGAAGCAAGAAACTCGACGAGGCTGGGCAAGTATTAGGTCAAACATATAAATCAACCCATGAACTTGGTCGTATTTTTCATGTAGCCCATCAGTCCATGAATCCTCGTCAACATTTTAAGATGGGAAATGGTGGAATTATTCTAGCAAGTGATTACAACGATCGCAGTTATTTCCATGGTCTCATGCATCCCTCCTCCCTATCACCTTCACAATCAAAAGCCATCGATTCAAGGCACCAACAATGGTACTTCAATAGTCATCAACCTTATAGAAGACCAAGTTACTTTAGCAACGAAGTTGTCTCCTCAACAACCTTACAAACGCAAGGAAGATCAATGTCTTCAAACCAAATTAACCTAATGGATGCTACCAGCATTGCACCCATGAAACCAAGCCAGTTTCTTGAAGAGAAAAAGTGGCCTCCCTTAGATATTATGAACAACCATCACTGGAAGAAAAGGCTACCTGCCAATATTAGTTCAAATAGTGGGTCGCAACCTGTTGTACATCAATTTGGCACCACTTCACCATCTCTAAGACCTAGCGAGTTGAACTTCGGAAACAACACAAGAATCAGCTGGGAACATCTATCAAACTCCGACGAGCATCGTAACTATTCCAACAGTTTAAAGCTAGAATTGGAGCCTCTTTTTCGGATTAAGTCGAATCAAGAAAAATTGCAGAAAGAGAAGCAATGGGCGCCTGATTTGCGACTGAGTTTAAGTCAGAGAGACGGCAACAATGATGGCAAGACTGATCATTGCAGAGAAACCCAAGAAATCAACACGAAACTTTCACTTTCATAG 1209 0.4194 MSEEYERSEEHADDDSSMGSSQKCSSFDLNEEASSEDNNDNDEGYDEEAKDEGTSTNKSSSITKEGSNERRGGVRQYVRSKMPRLRWTPELHLSFVHAVERLGGQERATPKLVLQLMNVRGLSIAHVKSHLQMYRSKKLDEAGQVLGQTYKSTHELGRIFHVAHQSMNPRQHFKMGNGGIILASDYNDRSYFHGLMHPSSLSPSQSKAIDSRHQQWYFNSHQPYRRPSYFSNEVVSSTTLQTQGRSMSSNQINLMDATSIAPMKPSQFLEEKKWPPLDIMNNHHWKKRLPANISSNSGSQPVVHQFGTTSPSLRPSELNFGNNTRISWEHLSNSDEHRNYSNSLKLELEPLFRIKSNQEKLQKEKQWAPDLRLSLSQRDGNNDGKTDHCRETQEINTKLSLS 402
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma08g01074 402 Gene3D - 82 139 - -
Gma08g01074 402 Pfam Myb-like DNA-binding domain 85 135 IPR001005 -
Gma08g01074 402 SUPERFAMILY Homeodomain-like 81 137 IPR009057 -
Gma08g01074 402 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 83 138 IPR006447 GO:0003677
Gma08g01074 402 MobiDBLite consensus disorder prediction 33 49 - -
Gma08g01074 402 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 79 139 IPR017930 -
Gma08g01074 402 MobiDBLite consensus disorder prediction 1 17 - -
Gma08g01074 402 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL7-LIKE 1 402 IPR044848 GO:0003700
Gma08g01074 402 MobiDBLite consensus disorder prediction 18 32 - -
Gma08g01074 402 PANTHER MYB-LIKE DNA-BINDING DOMAIN, SHAQKYF CLASS PROTEIN 1 402 - -
Gma08g01074 402 MobiDBLite consensus disorder prediction 1 77 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma08g01074 Gma-Chr8 9122640 9128747 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma08g01074 20 140 G2-like Transcription Factor Family AT2G42660 56.557 4.45e-34 125
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Gma08g01074 Myb_DNA-binding 2.8e-07 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma08g01074 - - gmx:100787138 803.897
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma08g01074 08 9122640 9128747 Gma08g01074 08 9122640 9128747 ECH
Gma05g01591 05 37684127 37689959 Gma08g01074 08 9122640 9128747 GST
Gma08g01074 08 9122640 9128747 Gma15g00789 15 6471269 6473990 PCT
Gma08g01074 08 9122640 9128747 Gma13g02024 13 35511560 35515226 PCT
Gma15g00789 15 6471269 6473990 Gma08g01074 08 9122640 9128747 PCT
Gma13g02024 13 35511560 35515226 Gma08g01074 08 9122640 9128747 PCT