Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma08g01017 ATGAATGGTTTAAGAAAAGATTATAAGCTTCCAGTTTTTCAGAAGAATGGGGAAACCAACCTCGACGATATTGAAGCTGTCTTTAAAGATTCTGAAGAGCACCATGTGACGGAGAAGAACGAACAGCAGTCAACAGCAATGAATGCATTTGAGTTAATTTCTATGTCCAAAGGGCTGAACCTTGAAAACTTGTTTGATACAGAGCAGGTATCAAGCTGA 219 0.3881 MNGLRKDYKLPVFQKNGETNLDDIEAVFKDSEEHHVTEKNEQQSTAMNAFELISMSKGLNLENLFDTEQVSS 72
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma08g01017 72 ProSiteProfiles NAF domain profile. 42 66 IPR018451 GO:0007165
Gma08g01017 72 PANTHER - 4 69 - -
Gma08g01017 72 Pfam NAF domain 45 68 IPR004041 GO:0007165
Gma08g01017 72 PANTHER CBL-INTERACTING SERINE/THREONINE-PROTEIN KINASE 3 4 69 - -
Gma08g01017 72 Gene3D Kinase associated domain 1, KA1 42 72 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma08g01017 Gma-Chr8 8553451 8553760 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma08g01017 4 69 CBL-interacting serine-threonine protein kinases AT2G26980 69.697 9.86e-28 101
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma08g01017 - - gmx:100794566 116.701