Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma08g00995 ATGGATAACCAGGATCAAAGAAGAACTCACACTGCAGGGCACGAGAGTCATGGAGTTCATCTGTGTCACAAATGTGGATGGCCATTTCCAAATCCACATCCGAGTGCCAAGCACAGGCGTGCTCATAAGAAGATCTGTGGAACCATTGAAGGTTACAAACTGTCCGCCTCCGAGGGACAACCCcatttgaatggctcagatgacgaacatgtttctgatgatgatcacaaaacaccagGTCCAAAATCCTTGGAGACAGGCAACAAAGAGAAGGGCAATGAAGGAAATGGAGAAAAAATAATTAGATCAGAAGATGAGGTGTTCTCGGATGCAGTTGCAGACTTTTCGGATAGTGGATCAATTCCAGAAATCAAGGAACGGTTGCAAGATAGTTTGGACTCAGGTGCTGATGTGGAAAGGGTTGACATAAAAGAAACAAAATTTTCAGGCTCTTCTGAGGACAAAGATTTCAATGATGCAAGTCAGTTAATTGACAAGTCAACTGATGACAGCCAAATTCAAAATCCTAATATTTTTCAAAATGAAAGTGTTGAATTGGGAAACATGGTGGAGTTGCAAGGTCAATTGTCGGGCCCTACTGTGGATCCATTGTCAAGTTCCATTGCAGACTTGAGAACCGAAGTATCAACTAATGTGGATAGTGATGTTTTTTTTGGTTTGTTAAGTGACTCACTTCCTGGCAAAGCTGAAGCCATGCTTGATATATTGCCAGAAAAGAAAATCCATGCTGTTGAGAATGTGACAGATTGCATTTTGATATCTGTTGCAAAGGAAACTAATTTGAAAGAAAAGGAtgagattaattctgctggagatgtgattgaaattgtggaatcatctgataatgttgtaggtgaaacatgtgaaggagtgtctaaaatagctgttagtgatgcaatttccttggatcatcaagtgggtgatggagctgttcatctgaaggaaaataatggcgctgagattaattcctacagagatgtggttgaaattgtggaatcatctgataaagttgtaggtgaaatgagtgaagaagtgtctaaaatagccgtttgtgatatagtttccttggatcatgaagtgggtgatggagctgttcatctgaaggaaaataatggtgctgagTTCCTTTCTTTGTTGCCCCCAGATAACCTCCCTCTTGAGTTAAACTCGGTTGTAATCACAAATGACGCACAGGGAGACTCTGCATATGTGGTACAGTTTGCTACTTCCAGTGATGACAAAATTTTGCCAGAAAAGGGAGAAGGAAATGTTAATGTTGATCTTCTTCCTACGTGTGATGATATATCTGATGAAGCACATCCTCAAAGTGAGTATGGAGACTTTAAAGATCTTGAAGGAGTGGTATACCAAAATCCTTTCCTACAATCATCCGAGTCATTGAAATATAAGGGAGATGACTTAAAGAACAATGTTACTGAGGAAAATAAATTTCATTTCAATGCAAACCAATTGAGTGAAAAAAGTGACATCCTCTCTCCAGATATGGATGTTCTAGATAATAGCATGAAGATGGAGCTGGTAAACAGTGAGCCTACGCCTAAAGAAGTGCATGCTGAACAGTGTACCGAAGTTTCTCCAGCCCAGCTCACAGTTGAAAGTCATCAAAGATCAGATGAGACTGATGCATCTATGAAAGCTATGAAAACTGAGAAAAATGAAATTCATATGGTTCACTTTTCTGAAGAGCATGGACCTGATGATGTGTGTAAAAATTCCCAGCAGATAAGTTTACCAGAAGATAGTTTAATGGCCTCTTCTAATGAGAGTCAGAGGGACGAATCCTTTAGGTCTGCAACTAGTGAAACAACTAGGGCAATTAACATAGACAGCACAAGTCATCATGAGGAAAAAATAACTGAAATAAATGATGTAGCTTTAGATGGCAAGGATGTAGAATCTAATTTAGAAAATGATATTGAAATTATATTGAAAGATCTTCAACCTGGTGACATCTTGCAATCTGAAGTCAAGCAATCAGATGACTTATTTAAGAGTGACAGCGCTGGTAAGAGTGATGCTGCTGGTGAAATGGGTAAAAATGAACAATGTGATATTCCTGATGCTCAATGTATGGAAAGGCCTACTGTGAGTGATGCTTTATTGCCAAAATCTGCTACTGGTCATTTTGAAAGCCCAGCTATTTCAGAGTCTTTAGACATTGTGGATGATGGACCTGTGAACAAGTCAAATGGTACAGAGTGCAGAAATATTAATCCACTACCAGGTTCCCAGAAAGACATAAAAGAAGATGAAATCAATATTAATATCAAACTAAATGAAGAATATAACAAATCTGTTGATACTTATACCGAATCCCGTCAAGCTCAAGATGCTGGACTATTAGTGAAAGCTACAGAAGACCTTGCTAGGGAATATACATCTTTAACTACTGTACCTTCTGCTCAGCCGGACAGGGAAGTGTCTAATGCTGTGCCTGTTCAAGATCAAACTGGTAATAACTTGGGTAAACTTGGTTCATCCAGAGTTGATGCTTCAGTTGACTCAGGTAGCCGGTGTGACAGTTTGGAAGGGAACTGGGGTTCTGTTTCAGTTCTCTCAATGCAATCCGATGCCCCAGCTGTTACTGATGCTGAAACTTTGCCATCAACTGGCTTGCTGGCATCAACAGGGAAATCAAGCTTGAACAACTCAAAAGCTACACCTGACAGACAGCAGTCTGGAAACTCTGAAATGTTTGAACCACCATCTTTCATGACCTTGGTTGATCCTAGTCAGGTTGTCAACGAGTCTCAAGGGAGGAAGAAGAATGAAGAAATAATTGCCAAGGTGACAAACTGGAGCACCAGTAAGGAGCACACTCCTCTGAAGAGCCTCTTAGGTGAGGCTGCCCATAGTAGCAAGCCAAGATCTCCAAAAATGGAAAACTCTGTGAATCAGAAGAGTGGTAAAGTTCTGGAGAAGAATGGTTCTGGATTGACAACTGTTAACTCCATTCTGGGTCCTGAATCCCCTGTGGCTCAAGTGGTTAAAGGAGAGGCTGCAAAAGAATGGAACTCTCCAGCAAGATATCCTGCAGACATCAAGAGAGAAAAAAGGAAAGTCAAGAGCAGACCATACTGGATACAATTGTTGGTACCCTTGGGGCCAGGCCCAACCGTGGCGCGTAGGGTTGAAACCCAATCCCCCAACTCCGCAACCATCGACCGAACGACGCCACCAGCAGCGAAACAACCTAAGAAATCCTTTCTCTCTTCTTTCTCCACATGCCAACACTCAAAGGAAAGCACTTCCATTATTGATTATCTAAATGCCAAGTTCGATTTCTCGAGAACTCAATCCTTCTACATCTCAAAACGTGTTTCAAGCAGCAGATTCCCCCAAAACCCCTTGTCTGTGCTCAGTTTTTTCAAACAATTTGGGTTTTCTGAAGCCCAGATTCTCTTTTTGATTCGTCACAAACCCCAGATACTGTTCACTGATGTTGACAAAATCTTGAGACCCAAAATTGAGCTCTTTCAGCTGTTGGGTCTCGAGCGCTCGGAGTTGTGCAAGTTCATTTCCAAGAATTCCTCCATTTTGACTTTCAGTTTGAAGAAAACATTGGTCCCCTCTGTGGAAGCTATTGGGAAAATTCTCTGCAGTGAGAAAGATTTTGTTCATGTTTTGCTCAGATGTGGCCGGATACTCCCAAATTACAAAAAATTTATGGACAATGTTGTCTTCTTGGAAAGTTGTGGCATTGTTGGGTCTCATCTTGCAATGCTACTCAAACTACAGCCAGGGCCTGCAAATGTTCAGAAGATCCCCAACTTTGCTTAG 3822 0.3731 MDNQDQRRTHTAGHESHGVHLCHKCGWPFPNPHPSAKHRRAHKKICGTIEGYKLSASEGQPHLNGSDDEHVSDDDHKTPGPKSLETGNKEKGNEGNGEKIIRSEDEVFSDAVADFSDSGSIPEIKERLQDSLDSGADVERVDIKETKFSGSSEDKDFNDASQLIDKSTDDSQIQNPNIFQNESVELGNMVELQGQLSGPTVDPLSSSIADLRTEVSTNVDSDVFFGLLSDSLPGKAEAMLDILPEKKIHAVENVTDCILISVAKETNLKEKDEINSAGDVIEIVESSDNVVGETCEGVSKIAVSDAISLDHQVGDGAVHLKENNGAEINSYRDVVEIVESSDKVVGEMSEEVSKIAVCDIVSLDHEVGDGAVHLKENNGAEFLSLLPPDNLPLELNSVVITNDAQGDSAYVVQFATSSDDKILPEKGEGNVNVDLLPTCDDISDEAHPQSEYGDFKDLEGVVYQNPFLQSSESLKYKGDDLKNNVTEENKFHFNANQLSEKSDILSPDMDVLDNSMKMELVNSEPTPKEVHAEQCTEVSPAQLTVESHQRSDETDASMKAMKTEKNEIHMVHFSEEHGPDDVCKNSQQISLPEDSLMASSNESQRDESFRSATSETTRAINIDSTSHHEEKITEINDVALDGKDVESNLENDIEIILKDLQPGDILQSEVKQSDDLFKSDSAGKSDAAGEMGKNEQCDIPDAQCMERPTVSDALLPKSATGHFESPAISESLDIVDDGPVNKSNGTECRNINPLPGSQKDIKEDEININIKLNEEYNKSVDTYTESRQAQDAGLLVKATEDLAREYTSLTTVPSAQPDREVSNAVPVQDQTGNNLGKLGSSRVDASVDSGSRCDSLEGNWGSVSVLSMQSDAPAVTDAETLPSTGLLASTGKSSLNNSKATPDRQQSGNSEMFEPPSFMTLVDPSQVVNESQGRKKNEEIIAKVTNWSTSKEHTPLKSLLGEAAHSSKPRSPKMENSVNQKSGKVLEKNGSGLTTVNSILGPESPVAQVVKGEAAKEWNSPARYPADIKREKRKVKSRPYWIQLLVPLGPGPTVARRVETQSPNSATIDRTTPPAAKQPKKSFLSSFSTCQHSKESTSIIDYLNAKFDFSRTQSFYISKRVSSSRFPQNPLSVLSFFKQFGFSEAQILFLIRHKPQILFTDVDKILRPKIELFQLLGLERSELCKFISKNSSILTFSLKKTLVPSVEAIGKILCSEKDFVHVLLRCGRILPNYKKFMDNVVFLESCGIVGSHLAMLLKLQPGPANVQKIPNFA 1273
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma08g00995 1273 MobiDBLite consensus disorder prediction 884 917 - -
Gma08g00995 1273 MobiDBLite consensus disorder prediction 63 103 - -
Gma08g00995 1273 MobiDBLite consensus disorder prediction 676 695 - -
Gma08g00995 1273 Pfam mTERF 1134 1259 IPR003690 GO:0003690|GO:0006355
Gma08g00995 1273 MobiDBLite consensus disorder prediction 961 987 - -
Gma08g00995 1273 MobiDBLite consensus disorder prediction 1 20 - -
Gma08g00995 1273 Gene3D Transcription termination factor 3, mitochondrial 1107 1268 IPR038538 -
Gma08g00995 1273 MobiDBLite consensus disorder prediction 56 103 - -
Gma08g00995 1273 PANTHER PENTATRICOPEPTIDE REPEAT (PPR) SUPERFAMILY PROTEIN 1 1044 - -
Gma08g00995 1273 PANTHER PENTATRICOPEPTIDE REPEAT (PPR) SUPERFAMILY PROTEIN 1 1044 - -
Gma08g00995 1273 SMART mt_12 1148 1179 IPR003690 GO:0003690|GO:0006355
Gma08g00995 1273 SMART mt_12 1184 1215 IPR003690 GO:0003690|GO:0006355
Gma08g00995 1273 MobiDBLite consensus disorder prediction 594 615 - -
Gma08g00995 1273 MobiDBLite consensus disorder prediction 828 853 - -
Gma08g00995 1273 MobiDBLite consensus disorder prediction 884 914 - -
Gma08g00995 1273 ProSitePatterns Zinc finger C2H2 type domain signature. 22 42 IPR013087 -
Gma08g00995 1273 MobiDBLite consensus disorder prediction 970 987 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma08g00995 Gma-Chr8 8391785 8400616 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Gma08g00995 mTERF 4.9e-13 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma08g00995 - - gmx:100820280 2035.38
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma08g00995 08 8391785 8400616 Gma08g00995 08 8391785 8400616 ECH