Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma08g00981 ATGGAGATCGTTCGTCCTCAGAATCGCAGAAACTCGTTTTCCTCTTCCAATGACGCCGTTTCTGCTCCCACCATTCCCCTCTATCGCTCTGCTCCCCCACTCGAAGTCAGGCTCGAGGATTTCGAGTCCTTCGCCATCGATCGCCTCCGAGTTCTCAAGGGGATTTCTGATGGTATGTCGCGTGGAAAAAAATCGGAAGAAATGGAGAATTTGGTAAAGGACCTGTGGAAAATGAATATGAGACATCAAGACGCATCTCAGGTTCTGAACAAGGATATTATATCACATTTTGTTCTACGTCTGGTGTATTGCAGAACGGAGGACTTGAGGAAATGGTTTCTTTCCACGGAATCTGCACTCTTTCGCTACCGTTTTCGCCTTCTGAATGCTGAAGCTCAGAGAGCAGTCATGGAAGAATTTGACCTTCCTTACAAGGCCGTTAGCAATGTGGAATTTGAGAGCATAAAAGAGAAATTGGGACAAGTTGCACGTTCTATGGGTCAGCCTTCGCCTACTGCAGATGCTATCTTCTACAAGGTACCATTTGAAGAAGTTCCAGAGCTTGTTGCTGGACGGAAGGTGTTTATAAATCAAGGATATGCATATGTTGCAATGAATCAGATTGTTTCACTTGTAGCCACACTATTCCGTAGTCAACTGTCAAAGGCACTAATCCTTACAAACAGAAAATGGACATCTTCAGTTAGAGAGCAAGAGAAACATAGGTTGACTCCTATTGTGGAAGCCCTGTCCTCAAGTTATCTGGGTCCTGATTATTCTCAGTCAAAAGAATATGCTGATATATCATTAAAGGACATTGATCAAGTTGCCAAGAGCTCATTTCCTTTGTGCATGCGTCACCTATTTGATAAGCTGAAAGAGGATCATCATTTAAAGCATGGAGGGAGGATGCAACTAGGCCTCTTTCTGAAGGGTGTTGGCATAAATCTGGATGATGCACTTGCGTTTTGGAGGTCAGAGTTCTCTAAAAAGGTTGGTTTGGAGAAGTTTGAGAAACAATATGCATACAACATACGCCATAATTATGGAAAGGAAGGGAAGAGAACTGACTACACTCCCTATTCTTGTCAAAAGATTATTTCATCAACTCCTGGAGCTGGAGATCATCATGGTTGCCCTTATCGAAATTTCAGTGAAGAGAATCTAAGAGCTGCTCTCAGCAGAATGGGGGTAAACAGTTGGGCAATGGAAGATGTGATGGACAAAGTGAAAAATAGACATTATCAGTTGGCTTGCACCTTGACATTTGAAGCTCTTCATGGCATGACCCAAAGAAGGATTCTTCAGCCTAAGTATTTTAATTATTGCAGAAGACTGGTGCCGGGGACTTTCTCAGGTGTGTCACACGTCGGTGCCTCTGGTCATGGATTTGCAGAGAGACAATAA 1407 0.4335 MEIVRPQNRRNSFSSSNDAVSAPTIPLYRSAPPLEVRLEDFESFAIDRLRVLKGISDGMSRGKKSEEMENLVKDLWKMNMRHQDASQVLNKDIISHFVLRLVYCRTEDLRKWFLSTESALFRYRFRLLNAEAQRAVMEEFDLPYKAVSNVEFESIKEKLGQVARSMGQPSPTADAIFYKVPFEEVPELVAGRKVFINQGYAYVAMNQIVSLVATLFRSQLSKALILTNRKWTSSVREQEKHRLTPIVEALSSSYLGPDYSQSKEYADISLKDIDQVAKSSFPLCMRHLFDKLKEDHHLKHGGRMQLGLFLKGVGINLDDALAFWRSEFSKKVGLEKFEKQYAYNIRHNYGKEGKRTDYTPYSCQKIISSTPGAGDHHGCPYRNFSEENLRAALSRMGVNSWAMEDVMDKVKNRHYQLACTLTFEALHGMTQRRILQPKYFNYCRRLVPGTFSGVSHVGASGHGFAERQ 468
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma08g00981 468 PANTHER DNA PRIMASE LARGE SUBUNIT 1 430 IPR007238 GO:0006269
Gma08g00981 468 Gene3D - 3 250 - -
Gma08g00981 468 MobiDBLite consensus disorder prediction 1 20 - -
Gma08g00981 468 Pfam Eukaryotic and archaeal DNA primase, large subunit 177 437 IPR007238 GO:0006269
Gma08g00981 468 PIRSF DNA_primase_large 2 448 IPR016558 -
Gma08g00981 468 PANTHER DNA PRIMASE LARGE SUBUNIT 1 430 - -
Gma08g00981 468 CDD PriL_PriS_Eukaryotic 27 429 IPR016558 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma08g00981 Gma-Chr8 8314034 8320600 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma08g00981 1 430 Core DNA Replication Machinery Family AT1G67320 66.524 0.0 650
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma08g00981 K02685 - gmx:100816023 862.833
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma05g01499 05 36886052 36894049 Gma08g00981 08 8314034 8320600 GST