Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma08g00944 ATGGTTGTCTGTCCGAATCAATTTCCTCTTCAATATGGTCTTGTATTTTGTTCTTGTGCCATCTTCGTTACTTTGCCAAGGTCTACCATTCAAGATTGCAGGCCTGAACCAGAGTGGCCAAAGGAGGGAAAAGTTGAACTTCATAACCTTCATATACAGAATGACCCTGCTGCTCCTATGGTCCTCAAAGATGTTACTTGTATCTTCCCAGGACAAAAgaaaattggtatagtagacaggacagggaatggaaaatctacgctggtgcaagccctctttcaagtggtggacccttatgaacgatgtatacttattgatggtgttgatatttccaagattggtctgcaagttttgagatgtaagcttggtataaccttgtttctaggtactgtaaggactaacttggatcctctggaacaccatgcagatcaagaactttgggagGTTCTCAGCAAGTGTCATCTTACTGAATTAGTTACGCAAGATCAAATTGAAGAAGAAATTGATTCGGACAGACAACCATTCCATGGTGCCAATATTGTGAAAGGCTACCCGAGAATGATCGTCAATTAG 573 0.2496 MVVCPNQFPLQYGLVFCSCAIFVTLPRSTIQDCRPEPEWPKEGKVELHNLHIQNDPAAPMVLKDVTCIFPGQKKIGIVDRTGNGKSTLVQALFQVVDPYERCILIDGVDISKIGLQVLRCKLGITLFLGTVRTNLDPLEHHADQELWEVLSKCHLTELVTQDQIEEEIDSDRQPFHGANIVKGYPRMIVN 190
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma08g00944 190 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 37 161 IPR027417 -
Gma08g00944 190 Gene3D - 28 179 IPR027417 -
Gma08g00944 190 Pfam ABC transporter 62 159 IPR003439 GO:0005524
Gma08g00944 190 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 28 162 - -
Gma08g00944 190 PANTHER OS01G0902100 PROTEIN 28 162 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma08g00944 Gma-Chr8 7963579 7964227 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma08g00944 43 144 Calmodulin-binding Proteins AT2G36910 31.193 1.25e-07 49.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma08g00944 - - gmx:102664445 396.356