Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma08g00938 ATGGAGTTCATATCAAGAGAAACCATCAAACCCTCGAACCCCACCCCTCCTCACCTCAGAATCCATCCTCTCTCCTTCATAGATCACATCGTTTTTCGCAACTACATCCCCTTGCTTTTCTTTTACAACTCCCCAAACCATGAGCAAGCATCCACAATATCAAAACTCAAGAAATCCTTATCCCAAGTTTTATCCCGATACTACCCTTTTGCAGGCAAGCTCAGAGATCAAGTTTCCATCGACTGCAACGACCAAGGAGTGTCCTTTCTAGTCACAAGGCTGAGATGCAACCTATCAACGATCCTCCAAAACCCCACAGAAGAATCGTTGAACCCTTTGTTCCCCGATGAACTACAGTGGAAACCTATGAGTAGCAGTAGTAGTTCAAGTATAATAGCCATACAAATAAACTGTTTTGCATGCGGAGGAATAGCAATGAGCGTGTGCATGTGTCACAAAGTTGGAGACGCGGCCACACTTTCAAATTTCATCAACGACTGGGCCACACTTAACCGCCAAAAAGAACTAGAACAAGAAACAGCAGAGTTGTTATTATTACCCTTCCCAGTACCCGGGGCTTCACTTTTCCCGCAAGAAAACTTGCCCGTTTTCCCAGAAGTTTTGTTCGTGGAAAACGACACCGTATGCAGAAGGTTTGTCTTCGAGGCCTCCAAGATCGACTCCCTCAAATCCACGGTGTCTTCCCACAACGTCCCGAACCCCACGCGCGTAGAAGTCGTCAGCGCGTTGATTTACAACCGCGCGGTTTCGGCTCTAGGGTTGATTTCCAAGACGACGTCGTTCCGCACCGCCGTGAACCTTCGCACGAGAACGGTTCCGCCGCTCCCGGAGAAGAGCGTGGGGAACTTGGTCTGGTTCCTCTTCGTGCTTAGCCCTTGGGAAACGGAGCTGCATGAGTTGGTGCTCAAAATGAAACAAGGCTTAACCGAGTTTTGTGAAACGTATGCGAAGAAATTTGGAGGGGAGGATAAGGACATGTCGTTCATCTCCGAGTGTCTGAAGCAAGCTGCTTCGGTTCCCGAACCACAGCCTGGTGGTTCGGATGATGAGGAGAGTCAAATAGTAACTATGTTTTGTTGTGCGAGTTGGTGCAGGTTTCCGATGTATGAAGCGGATTTTGGTTGGGGGAAACCGGTGTGGTTCACCACTAGTAAGTGTCCCGTGAAGAATAGCATTGTTTTGATGGATACCAGAGATGGGGGTGGGATTGAAGCCATCGTGAACATGGAGGAGCAAGACATGGCCAGGTTTGAGCGTGACGTGGAGCTTCTGAAATATGCTTCTCTTAATCCTGCTGTTGGACATGGTAATTAA 1335 0.4831 MEFISRETIKPSNPTPPHLRIHPLSFIDHIVFRNYIPLLFFYNSPNHEQASTISKLKKSLSQVLSRYYPFAGKLRDQVSIDCNDQGVSFLVTRLRCNLSTILQNPTEESLNPLFPDELQWKPMSSSSSSSIIAIQINCFACGGIAMSVCMCHKVGDAATLSNFINDWATLNRQKELEQETAELLLLPFPVPGASLFPQENLPVFPEVLFVENDTVCRRFVFEASKIDSLKSTVSSHNVPNPTRVEVVSALIYNRAVSALGLISKTTSFRTAVNLRTRTVPPLPEKSVGNLVWFLFVLSPWETELHELVLKMKQGLTEFCETYAKKFGGEDKDMSFISECLKQAASVPEPQPGGSDDEESQIVTMFCCASWCRFPMYEADFGWGKPVWFTTSKCPVKNSIVLMDTRDGGGIEAIVNMEEQDMARFERDVELLKYASLNPAVGHGN 444
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma08g00938 444 Gene3D - 212 435 IPR023213 -
Gma08g00938 444 Gene3D - 1 202 IPR023213 -
Gma08g00938 444 PANTHER HXXXD-TYPE ACYL-TRANSFERASE FAMILY PROTEIN 3 440 - -
Gma08g00938 444 Pfam Transferase family 2 430 - -
Gma08g00938 444 PANTHER F21J9.9 3 440 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma08g00938 Gma-Chr8 7908149 7909708 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma08g00938 25 426 Monolignol Biosynthesis Gene Families AT5G48930 23.148 8.53e-26 107
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma08g00938 - - gmx:100806928 884.404
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma08g00938 08 7908149 7909708 Gma08g00938 08 7908149 7909708 ECH
Gma05g01456 05 36386268 36386906 Gma08g00938 08 7908149 7909708 GST