Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma08g00929 ATGAAACTTTCTTCACCTGGTTTTAGTCCTCCACCCCAGGAAGGAGAAAAGCGAGTTCTAGATTCAGAACTTTGGCATGCTTGTGCTGGTCCTCTTGTTTCTTTACCAGCTGTTGGAAGCCGAGTGGTATACTTTCCGCAAGGTCACAGTGAACAGGTTGCTGTGTCTACCAACAGGGAAGTGGATGGCCATATACCTAACTATCCAAGCTTACCACCGCAGCTTATTTGTCAACTTCATAATCTGACTATGCATGCAGATACTGAGACAGATGAAGTATATGCTCAGATGACCTTGCAACCTCTTAATCCTCAAGAGCAGAAGGGAGCATACCTTCCAGCTGAGTTGGGCACTCCGAGTAAACAGCCAACAAACTACTTCTGCAAAATTTTGACAGCCAGTGACACTAGCACTCATGGGGGATTCTCTGTTCCTCGCAGGGCAGCTGAAAAAGTTTTTCCTCCATTGGACTTTTCACAACAGCCTCCTTGTCAAGAGTTAATTGCTAGGGATTTGCATGGTAATGAGTGGAAATTTAGACATATCTTCCGTGGCCAGCCCAAAAGGCATCTACTTACAACAGGATGGAGTGTGTTTGTGAGTGCTAAAAGACTTGTTGCCGGTGATTCAGTGCTGTTTATCTGGAATGAAAAGAATCAATTGCTTCTTGGAATTCGGCGTGCTAATCGACCTCAACCTGTGATGCCTTCATCAGTGTTGTCAAGTGATAGCATGCACTTGGGGCTTCTTGCTGCTGCAGCTCATGCAGCTGCAACTAATAGTCGTTTCACCATCTTTTATAACCCACGTGCTAGCCCATCAGAATTTGTCATACCTTTAGCAAAGTATGTTAAAGCTGTATATCATACTCGAGTTTCAGTTGGTATGCGCTTCAGGATGCTGTTTGAAACAGAGGAATCTAGTGTGCGTCGATACATGGGCACAATAACTGGCATTAGTGACTTGGATTCTATTCGGTGGCCAAATTCCCATTGGCGCTCAGTCAAGGTTGGCTGGGATGAATCCACAGCAGGAGAGAGGCAACCTCGAGTGTCTTTATGGGAAATTGAGCCATTAACAACATTTCCAATGTATCCATCTCCATTTCCCCTTAGGCTTAAGAGACCGTGGCCTCCAGGACTGCCTTTGTTCCATGCAGGCTTGAAGGATGATGATTTTGGAATAAATTCTTCACTAATGTGGCTTCGAGACACAGACAGAGGTCTTCCATCTCTTAATTTTCAGGGTATTGGTGTTAGTCCTTGGATGCAGCCAAGGCTTGATCCCTCAATGGTGAATTATCAATCAGATATGTACCAAGCTATGGCTGCCGCTGCACTTCAGGATATGTGGACTTCAAATCCTTCCAAACAGCATCCTACTTCCTCAATTCAGTTTCAGCAACCGCAGAACTTCCCCAACCAGACTTCTCCCTTAATGCAAACTCAATTGTTGCAGCAGTCTCCATCTCAGCAGGCTTTTCCAAATAGTCAAGAAAATCCACATCCGTCTCCATCTCAATCTCAGGCTCAAactcaaacacactttcagcagcatctacagcatcagcactcattcaataatcagaatcagcatcatcttctgccgcagcagcagcaacaaccacaacaaccgcagttgcaacagcaacaagtggtagatcatcaacagaTTTCAAGTGTTGTCTCTACAATGTCTCAGTTTGTTTCAGCAGCTCAGTCTCAATCACCACCCATGCAAGCTATCTCTTCACTTGGCCATCAGCAAAGCTTTTCTGATTCAAATGGAAACCCCACGACTACTGCTATTGTTTCTCCCCTGCATAGTATATTGGATTCATTTCCTCAGGATGACACATCTCACCTTCTCAGCCTTCCTAGATCCACTTCTTGGGTTCCTGTTCAACATTCGACTGCATGGCCACCCTCCAAGCGTGTTGTGGTGGATCCTCTCCTTTCTTCTGGAGCATCTCAATGTGTTCTGCCTCAAGTGGAGCAGTTAGGGCAGCCACATAGTACCATGGCTCAAAATGGCATTGCATTGCCAGCCTTTCCTGGTAGGGAGTGTACAATAGAAGGAAGCAATGATCCACAAAATCATCTTTTGTTTGGTGTCAATATAGAGCCCTCGTCACTTCTAATGCATAATGGGATGTCAAGTCTTAAGGGAGTTAGCAGCAACAGTGACTCACCCACAATACCTTTTCAATCTTCTAATTACCTGAACACCACAGGACCTGATTCCTCATTGAATCCTGGAATGACACACAATATTGGTGAAACGGGCTTCCTGCAAACTCCAGAAAATGGGGGGCAAGGAAACCCATCCAACAAAACCTTTGTGAAGGTTTACAAGTCAGGGTCCTTTGGAAGATCCTTGGACATCACTAAATTCACCAGCTACCCTGAGCTACGCAGCGAGCTTGCTCGTATGTTTGGCCTTGAAGGTGAGTTGGAGGACCCTGTGAGATCAGGCTGGCAGCTTGTATTCGTTGACCAAGAGAATGACGTTCTGCTCCTTGGTGATGGCCCGTGGCCGGAATTTGTAAATAGTGTAGGGTATATCAAGATACTTTCCCCTCAGGAAGTGCAGCAGATGGGCAACAATGAACTTGAGCTTCTTAACTCGGTCCCCATTCAGAGGCTCTCTAACGGTGTCTGTGAGGACCCAAGAAATTTAAGCACTGGGATAACAACTGTGGGGTCTTTAAACTACTGA 2718 0.4327 MKLSSPGFSPPPQEGEKRVLDSELWHACAGPLVSLPAVGSRVVYFPQGHSEQVAVSTNREVDGHIPNYPSLPPQLICQLHNLTMHADTETDEVYAQMTLQPLNPQEQKGAYLPAELGTPSKQPTNYFCKILTASDTSTHGGFSVPRRAAEKVFPPLDFSQQPPCQELIARDLHGNEWKFRHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRANRPQPVMPSSVLSSDSMHLGLLAAAAHAAATNSRFTIFYNPRASPSEFVIPLAKYVKAVYHTRVSVGMRFRMLFETEESSVRRYMGTITGISDLDSIRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSPFPLRLKRPWPPGLPLFHAGLKDDDFGINSSLMWLRDTDRGLPSLNFQGIGVSPWMQPRLDPSMVNYQSDMYQAMAAAALQDMWTSNPSKQHPTSSIQFQQPQNFPNQTSPLMQTQLLQQSPSQQAFPNSQENPHPSPSQSQAQTQTHFQQHLQHQHSFNNQNQHHLLPQQQQQPQQPQLQQQQVVDHQQISSVVSTMSQFVSAAQSQSPPMQAISSLGHQQSFSDSNGNPTTTAIVSPLHSILDSFPQDDTSHLLSLPRSTSWVPVQHSTAWPPSKRVVVDPLLSSGASQCVLPQVEQLGQPHSTMAQNGIALPAFPGRECTIEGSNDPQNHLLFGVNIEPSSLLMHNGMSSLKGVSSNSDSPTIPFQSSNYLNTTGPDSSLNPGMTHNIGETGFLQTPENGGQGNPSNKTFVKVYKSGSFGRSLDITKFTSYPELRSELARMFGLEGELEDPVRSGWQLVFVDQENDVLLLGDGPWPEFVNSVGYIKILSPQEVQQMGNNELELLNSVPIQRLSNGVCEDPRNLSTGITTVGSLNY 905
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma08g00929 905 SUPERFAMILY CAD & PB1 domains 774 854 - -
Gma08g00929 905 Gene3D - 125 228 IPR015300 -
Gma08g00929 905 Pfam B3 DNA binding domain 127 228 IPR003340 GO:0003677
Gma08g00929 905 Gene3D - 291 363 - -
Gma08g00929 905 PANTHER AUXIN RESPONSE FACTOR 1 889 - -
Gma08g00929 905 MobiDBLite consensus disorder prediction 452 524 - -
Gma08g00929 905 Pfam AUX/IAA family 774 863 IPR033389 -
Gma08g00929 905 Gene3D - 774 867 - -
Gma08g00929 905 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 1 889 IPR044835 GO:0003677|GO:0006355|GO:0009725
Gma08g00929 905 SUPERFAMILY DNA-binding pseudobarrel domain 112 256 IPR015300 -
Gma08g00929 905 Pfam Auxin response factor 253 336 IPR010525 GO:0003677|GO:0005634|GO:0006355|GO:0009725
Gma08g00929 905 ProSiteProfiles B3 DNA-binding domain profile. 127 229 IPR003340 GO:0003677
Gma08g00929 905 SMART B3_2 127 229 IPR003340 GO:0003677
Gma08g00929 905 CDD B3_DNA 126 227 IPR003340 GO:0003677
Gma08g00929 905 ProSiteProfiles PB1 domain profile. 778 862 IPR000270 GO:0005515
Gma08g00929 905 MobiDBLite consensus disorder prediction 573 598 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma08g00929 Gma-Chr8 7830095 7835619 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma08g00929 1 484 B3 DNA Binding Superfamily AT1G30330 84.049 0.0 815
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3-ARF Gma08g00929 B3 1.7e-22 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma08g00929 - - gmx:100806203 1683.31
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma08g00929 08 7830095 7835619 Gma08g00929 08 7830095 7835619 ECH
Gma05g01448 05 36298030 36305255 Gma08g00929 08 7830095 7835619 GST
Gma18g00149 18 1190519 1197464 Gma08g00929 08 7830095 7835619 PCT
Gma11g02425 11 39610141 39618563 Gma08g00929 08 7830095 7835619 PCT