Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma08g00922 ATGGAGCAGCCAAGTGTGGCGATTCTGCCATGGATGCATCACCCTGTCGACATCACTCGCTGTCAAGAACTCCCCGTCTGTAGTGTTCCTTTGATGGAACGCAGGTTACAGTCGGTACTGGAGGAGAACATGGGAATCTCGAAGCTATTCTCGGTTCAAGTCGCACTTTGGCAAGAAACGGTTGGATCAGATGACTTTGAGCGAGACCTTTGCATAAACTCGCCCACCGAAAGTGGCAAAACCTTGGCTTATGCTCTTCCCATCGTTCAAAACTTGTCCACCAACACCAGTGACCGCCTCTTTGCTTTGGTTGTAGTTCCCACTCGTGACCTTGCTTTGCAGGTTAAGCGCGTCTTCGATGCCCTTGCATCATCGCTGGGTCTCCACATTGGCTTGGCTGCTGGTCAATCTTCGCTTCGCCACGAGCTTTCTAGCCTCATTTATCTACCTGGAGAAGACGACGGTCCAGATCCTGGTTTTTTGTCTCCTTTGTGGTTCCAAAGCAAGGTCAACATATTGGTAGCGACCCCTGGAAGGCTAATGGACCATGTTAACAAGTTGTCGTTGAAGCATCTTCGTTATCTCGTGGTTGACGAAGCAGATCGATTGCTACGCGAGGACTACCAGTCCTGGTATCAAGGAGTTTTCTGGTCTAAAACATCAGCTGGTTCAAATCTATTGTCCAAGATCCCGTGA 696 0.4957 MEQPSVAILPWMHHPVDITRCQELPVCSVPLMERRLQSVLEENMGISKLFSVQVALWQETVGSDDFERDLCINSPTESGKTLAYALPIVQNLSTNTSDRLFALVVVPTRDLALQVKRVFDALASSLGLHIGLAAGQSSLRHELSSLIYLPGEDDGPDPGFLSPLWFQSKVNILVATPGRLMDHVNKLSLKHLRYLVVDEADRLLREDYQSWYQGVFWSKTSAGSNLLSKIP 231
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma08g00922 231 SMART ultradead3 45 231 IPR014001 -
Gma08g00922 231 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 32 214 IPR027417 -
Gma08g00922 231 ProSitePatterns DEAD-box subfamily ATP-dependent helicases signature. 196 204 IPR000629 -
Gma08g00922 231 PANTHER ATP-DEPENDENT RNA HELICASE DDX51 33 216 - -
Gma08g00922 231 Pfam DEAD/DEAH box helicase 67 216 IPR011545 GO:0003676|GO:0005524
Gma08g00922 231 Gene3D - 13 225 IPR027417 -
Gma08g00922 231 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 61 231 IPR014001 -
Gma08g00922 231 PANTHER RNA HELICASE 33 216 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma08g00922 Gma-Chr8 7750593 7752027 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma08g00922 69 216 Eukaryotic Initiation Factors Gene Family AT3G13920 27.333 1.81e-12 64.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma08g00922 K14807 - gmx:100803202 426.017
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma08g00922 08 7750593 7752027 Gma08g00922 08 7750593 7752027 ECH