Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma08g00911 ATGGAGGAGGAGGATGAGATTCTTCAAGCACGGGCGTGTAAGTTGCCAAGAAGAAGAGGCAGTGATGGGGAGAGCACGAACAGCAGGTTCCACAGCAGCAGCTGGCACCACCACAACTCTTCGAGGATCATAAGGGTGTCTCGAGCATCTGGTGGCAAAGACAGGCACAGCAAGGTTATGACTTCAAAAGGGTTGAGAGATAGAAGGGTTAGGCTTTCTGTGAACACTGCCATTCAGTTCTATGACCTTCAAGATCGCTTGGGTTATGACCAACCTAGTAAAGCTGTGGAGTGGCTTATCAAATCTGCTTCTGATGCCATTTCTGAACTTCCTTCTTTGAACAATTTCCCTGACACTCCCCAAAGTGATGATCATGAGAAGAGGGAAAACACCGCTGATGTTGCTGTTGGGGTAGTAGATGGTGAGAATGGCAATGGCCAGAACTTGAGTTTGGCTAAATCTGCTTGTAGTAGCAATTCTGAGACTAGCAAAGGTTCTGGCTTGTCCCTCTCAAGGTCTGATATTCGTGTGAAGGCTAGAGAGAGGGCAAGGGAGAGAACAACAAAGGAAAAGGAGAAAGAGAAAGAGAAAAATGATGAGTCTCATCGTCATCATCACAATGTTGTTGTTGTTCCTCATCACAACCACAATGTGAACCTCGTTTCACAAACAGCTTCTTTCACGGAGCTACTCACTGGCAGTGATCCCAACAAAGGGTGTGATGAGGCTAATAACAACATGATGTTCAACAAAGCAGCAGGTAGACTGCAATGGTGTTCATCAACAACACCTATGGACTACTTTCTGGGGCTTTCCTCTTCTAGAACAACGACACACAATCACAATCACCTTCATCATCATCAATATTCTTCTTCTTCTTCTAGTGGGTTCTCATTGGCACAAATCCAACTAGGACATTCTCTTCCTGAGGCAATGAATCATGTTTCAGCATTCAACAACAATGTGAGTGGTGATAACCACAACCACTCATCATCAGATCCTCATCTGCAGCAGCAACACTTGTCATTGATACCGGATCATCTTATGTCAGCTGTGGTTACTTCTTCTGCTGCTTCTTCTCATCATCATCATCATCATCAGCCCAGCGGGAACGATTACAATCTGAACTCCACCATGTCTTCGGGCCTCGCTGGTTACAATAGGGGGACCCTTCAGTCCAATTCTCCGTCTCTGCTGCCTCACTCGCAGAGGTTTTCGCCTATAGACGGATCCACTGTACCTTTCTTCATTGGAGCTGCTTCTTCTGCTGCTGCAGTTGCTGCTCCTGCCATGGAGAACAACAACAACAACAACCATCACCAGCATCAGTTCTCTTCTGTTTTTGATGGCAGCCGCTTGCAACTTTACTATGGCCATTCTGACCAGAAGGGGAAAGCCAAGAACTGA 1407 0.4627 MEEEDEILQARACKLPRRRGSDGESTNSRFHSSSWHHHNSSRIIRVSRASGGKDRHSKVMTSKGLRDRRVRLSVNTAIQFYDLQDRLGYDQPSKAVEWLIKSASDAISELPSLNNFPDTPQSDDHEKRENTADVAVGVVDGENGNGQNLSLAKSACSSNSETSKGSGLSLSRSDIRVKARERARERTTKEKEKEKEKNDESHRHHHNVVVVPHHNHNVNLVSQTASFTELLTGSDPNKGCDEANNNMMFNKAAGRLQWCSSTTPMDYFLGLSSSRTTTHNHNHLHHHQYSSSSSSGFSLAQIQLGHSLPEAMNHVSAFNNNVSGDNHNHSSSDPHLQQQHLSLIPDHLMSAVVTSSAASSHHHHHHQPSGNDYNLNSTMSSGLAGYNRGTLQSNSPSLLPHSQRFSPIDGSTVPFFIGAASSAAAVAAPAMENNNNNNHHQHQFSSVFDGSRLQLYYGHSDQKGKAKN 468
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma08g00911 468 MobiDBLite consensus disorder prediction 10 57 - -
Gma08g00911 468 MobiDBLite consensus disorder prediction 10 25 - -
Gma08g00911 468 ProSiteProfiles TCP domain profile. 52 110 IPR017887 -
Gma08g00911 468 MobiDBLite consensus disorder prediction 370 403 - -
Gma08g00911 468 MobiDBLite consensus disorder prediction 174 204 - -
Gma08g00911 468 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 21 468 IPR005333 GO:0003700
Gma08g00911 468 MobiDBLite consensus disorder prediction 353 403 - -
Gma08g00911 468 ProSiteProfiles R domain profile. 173 191 IPR017888 -
Gma08g00911 468 PANTHER TRANSCRIPTION FACTOR TCP24 21 468 - -
Gma08g00911 468 MobiDBLite consensus disorder prediction 317 336 - -
Gma08g00911 468 MobiDBLite consensus disorder prediction 143 170 - -
Gma08g00911 468 Pfam TCP family transcription factor 51 193 IPR017887 -
Gma08g00911 468 Coils Coil 177 197 - -
Gma08g00911 468 MobiDBLite consensus disorder prediction 138 204 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma08g00911 Gma-Chr8 7642662 7650356 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma08g00911 33 468 TCP Transcription Factor Family AT4G18390 42.920 3.22e-76 241
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Gma08g00911 TCP 5.8e-40 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma08g00911 - - gmx:100802134 793.112
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma08g00911 08 7642662 7650356 Gma08g00911 08 7642662 7650356 ECH