Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma08g00905 ATGAGGAAGAATTGCAACTTGGAGCTTCGCCTTTTCCCTCCTTCCCTCTCCGATCTTCGCCCCATGATGGAAGCAGAAGTTAGTGAGAGACCCCAACAACAGGTCGCCCACCATCAACAGCAACAGCAACCACAACCACAACATCCGCTGACCATTTTCTATGATGGCAAGATTTCAGTTTCAGATGTCACAGAGCTTCAGGCCAGATCCATATTAATGCTAGCAAATAAAGAGATGGAGAAAAGAGTGATGACACCAACGGGGTCAGAACCATCTTCACCAATATTACTGCAATCACCTCATAACATGTATAGCCCCGGCACTGGACTTTCCATGAAAAGATCACTGCAGAGGTTTCTCCAGAAGAGAAAGAATCGTGTCCAAGAAACATCCCCATACCATCACGAGCTAATTAATGTTAAATTATCAAAATCATCAAGGGAAAACAAATGA 453 0.4415 MRKNCNLELRLFPPSLSDLRPMMEAEVSERPQQQVAHHQQQQQPQPQHPLTIFYDGKISVSDVTELQARSILMLANKEMEKRVMTPTGSEPSSPILLQSPHNMYSPGTGLSMKRSLQRFLQKRKNRVQETSPYHHELINVKLSKSSRENK 150
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma08g00905 150 MobiDBLite consensus disorder prediction 25 48 - -
Gma08g00905 150 MobiDBLite consensus disorder prediction 82 108 - -
Gma08g00905 150 MobiDBLite consensus disorder prediction 32 48 - -
Gma08g00905 150 PANTHER - 1 135 - -
Gma08g00905 150 ProSiteProfiles Tify domain profile. 43 77 IPR010399 -
Gma08g00905 150 MobiDBLite consensus disorder prediction 86 108 - -
Gma08g00905 150 SMART tify_2 43 77 IPR010399 -
Gma08g00905 150 PANTHER PROTEIN TIFY 4A-RELATED-RELATED 1 135 IPR040390 -
Gma08g00905 150 Pfam tify domain 45 76 IPR010399 -
Gma08g00905 150 Pfam Jas motif 113 133 IPR018467 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma08g00905 Gma-Chr8 7550613 7552776 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma08g00905 1 134 Tify Gene Family AT1G30135 44.604 2.29e-26 95.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Tify Gma08g00905 tify 2.3e-11 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma08g00905 - - gmx:100305565 277.715
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma08g00905 08 7550613 7552776 Gma08g00905 08 7550613 7552776 ECH