Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma08g00899 ATGAAGAGGGAACGCGAGCAGCTTGGTTCCATCGCAGGGACCTCAAGCTGCGGTTATTCAAGCGGAAAATCGAATCTTTGGGAGGAAGAAGGAGGCATGGACGAGCTTCTTGCGGTGGTGGGTTACAAGGTTAGGTCATCGGACATGGCGGAAGTGGCGCAGAAGCTTGAGCGTCTCGAAGAAGCCATGGGAAATGTCCAAGATGACCTCCCGGAGATTTCAAACGACGTCGTTCATTACAACCCTTCCGACATCTCCAACTGGCTCGAAACCATGCTTTCTAATTTTGACCCTCTCCCCTCCGAAGAGCCGGAAAAGGACTCCGCCTCGTCGGACTACGATCTTAAGGCTATTCCGGGGAAAGCAATTTATGGAGCTAGCGACGCGCTACCAAACCCTAAGCGCGTGAAAGCCGACGAGTCAAGGCGCGCGGTGGTGGTCGTTGACTCGCAGGAGAACGGGATCCGCCTCGTGCACAGCCTCATGGCGTGCGCGGAGGCCGTGGAGAACAACAACCTCGCCGTGGCGGAGGCGCTGGTGAAGCAGATCGGCTTCCTCGCTGTGTCGCAGGTTGGAGCTATGAGGAAAGTCGCAATCTACTTCGCCGAAGCGCTCGCGAGGCGAATCTACAGAGTCTTCCCTCTGCAACACTCTCTCTCCGATTCTCTTCAGATTCACTTCTACGAAACCTGTCCATACCTCAAGTTCGCACACTTCACCGCGAACCAGGTTATCCTCGAAGCGTTCCAAGGAAAGAACCGCGTTCACGTGATTGATTTCGGTATCAACCAGGGGATGCAGTGGCCGGCGCTGATGCAAGCCCTAGCGGTTCGCACCGGCGGTCCTCCGGTTTTCCGACTCACCGGAATCGGGCCGCCGGCGGCGGACAACTCCGACCACCTCCAGGAGGTAGGGTGGAAGCTCGCGCAGCTGGCGGAGGAGATCAACGTGCAGTTCGAGTACCGTGGCTTCGTCGCGAACAGCCTCGCCGATCTCGACGCCTCCATGCTCGATCTCCGGGAAGGCGAAGCCGTCGCTGTGAACTCTGTCTTCGAGTTTCACAAGCTCCTCGCCCGCCCCGGCGCGGTGGAGAAAGTACTCTCCGTCGTACGGCAGATTCGGCCGGAGATTGTCACCGTCGTCGAGCAAGAAGCGAACCACAACAGACTGAGTTTTGTCGACCGGTTCACGGAGTCACTGCACTATTATTCAACCCTATTCGACTCGCTGGAGGGTTCGCCTGTGAACCCTAACGATAAGGCCATGTCGGAGGTTTACTTAGGGAAGCAAATCTGCAACGTGGTGGCGTGCGAGGGAATGGACCGCGTGGAAAGGCACGAGACGCTGAACCAGTGGCGGAACCGGTTCGTTTCGACCGGATTTTCTTCGGTTCACTTGGGTTCGAACGCGTACAAGCAGGCCAGCATGTTGCTCGCGCTTTTTGCGGGTGGGGATGGGTATAGGGTGGAAGAGAACAATGGTTGTCTCATGTTGGGATGGCACACTAGGCCCTTGATTGCCACCTCCGCGTGGCAACTCGCTGCAACTCGCTGA 1554 0.5734 MKREREQLGSIAGTSSCGYSSGKSNLWEEEGGMDELLAVVGYKVRSSDMAEVAQKLERLEEAMGNVQDDLPEISNDVVHYNPSDISNWLETMLSNFDPLPSEEPEKDSASSDYDLKAIPGKAIYGASDALPNPKRVKADESRRAVVVVDSQENGIRLVHSLMACAEAVENNNLAVAEALVKQIGFLAVSQVGAMRKVAIYFAEALARRIYRVFPLQHSLSDSLQIHFYETCPYLKFAHFTANQVILEAFQGKNRVHVIDFGINQGMQWPALMQALAVRTGGPPVFRLTGIGPPAADNSDHLQEVGWKLAQLAEEINVQFEYRGFVANSLADLDASMLDLREGEAVAVNSVFEFHKLLARPGAVEKVLSVVRQIRPEIVTVVEQEANHNRLSFVDRFTESLHYYSTLFDSLEGSPVNPNDKAMSEVYLGKQICNVVACEGMDRVERHETLNQWRNRFVSTGFSSVHLGSNAYKQASMLLALFAGGDGYRVEENNGCLMLGWHTRPLIATSAWQLAATR 517
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma08g00899 517 Pfam Transcriptional regulator DELLA protein N terminal 34 100 IPR021914 -
Gma08g00899 517 ProSiteProfiles GRAS family profile. 148 512 IPR005202 -
Gma08g00899 517 SMART DELLA_2 34 106 - -
Gma08g00899 517 MobiDBLite consensus disorder prediction 1 25 - -
Gma08g00899 517 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 17 - -
Gma08g00899 517 Gene3D - 32 96 IPR038088 -
Gma08g00899 517 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 13 139 IPR005202 -
Gma08g00899 517 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 149 513 IPR005202 -
Gma08g00899 517 MobiDBLite consensus disorder prediction 9 23 - -
Gma08g00899 517 Pfam GRAS domain family 157 512 IPR005202 -
Gma08g00899 517 Coils Coil 49 76 - -
Gma08g00899 517 PANTHER DELLA PROTEIN GAI1-RELATED 13 139 IPR030006 GO:0003712|GO:0005634
Gma08g00899 517 PANTHER DELLA PROTEIN GAI1-RELATED 149 513 IPR030006 GO:0003712|GO:0005634
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma08g00899 Gma-Chr8 7454740 7456936 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma08g00899 28 515 GRAS Transcription Factor Family AT1G14920 69.098 0.0 721
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Gma08g00899 GRAS 4.6e-136 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma08g00899 K14494 - gmx:100797336 1005.36