Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma08g00889 ATGGACAAGGACAAGTCTAATACTCACAGCTTTCTTCACAGTATTGTTAAACACTTCAAATTCGGTTCCCCTAAAGAGCGAAACAATGAAGCTGACATACAGCAAATGGCTGCACAGGAGCAGAAGATCTTCGCCTACGAAACCTTGGCAGCTGCTACTAAGAATTTTAGTGCTATTCataagcttggtgaaggaggctttggacccgtctacaagGGGAAGCTGAATgatgggagagagattgctgtgaagaagttatcacacacttcgaaccaagggaagaaggagttcatgaatgaggcaaagttgttggctcgtgtgcagcatcggaatgtggtgaatttggtgggctattgtgtccatggcaccgagaaactacttgtttatgagtatgttgctcatgaaagcctagacaaacttctattcaaatcacaaaagagagagcagcttgattggaaacgtaggattggaataatcacaggcgtggcaaaggggttgctttatcttcacgaagactcacacaattgcatcatccatcgcgatatcaaggcgagtaacatcttgcttgatgataaatggacgccaaagattgcagattttgggatggctcgtcttttcccggaagatcaaagccaggtccatacacgtgtggctggaaccaatgggtatatggctccggaatacgtgatgcatggaaatctttcggtgaaggcagatgtatttagctatggagttttggtattggagttgatcaccggccaacgaaacTCTTCTTTTAATTTGGACGTGGATGCGCAAAATCTGCTTGATTGGGCATACAAGATGTACAAGAAAGGGAAGAGCTTAGAAATTGTGGATTCTGCATTAGCATCTACGATAGTAGCCGAAGAAGTAGCAATGTGCGTTCAGCTGGGTCTGTTATGCACTCAAGGCGATCCTCAGCTACGTCCCACGATGAGGCGCGTGGTTGTGATGCTGTCGAGGAAGCCAGGGAACATGCAAGAACCTACGAGACCAGGAGTACCAGGTTCAAGATACAGAAGACCTCGGAGACACTCTGCATTGTCTTCCACAGTGGGTACCTCTGGTGCCTCTGATTCACACACTTCTGATTCTAGTAATAATTATAATACCACGGTTACTACTAGTGCCACGGGGACTATCTCAGCTACTGCAGAAACAGACCCAAAAGGGAAACGTCCAATTCGGGAGGGTTAG 1218 0.2422 MDKDKSNTHSFLHSIVKHFKFGSPKERNNEADIQQMAAQEQKIFAYETLAAATKNFSAIHKLGEGGFGPVYKGKLNDGREIAVKKLSHTSNQGKKEFMNEAKLLARVQHRNVVNLVGYCVHGTEKLLVYEYVAHESLDKLLFKSQKREQLDWKRRIGIITGVAKGLLYLHEDSHNCIIHRDIKASNILLDDKWTPKIADFGMARLFPEDQSQVHTRVAGTNGYMAPEYVMHGNLSVKADVFSYGVLVLELITGQRNSSFNLDVDAQNLLDWAYKMYKKGKSLEIVDSALASTIVAEEVAMCVQLGLLCTQGDPQLRPTMRRVVVMLSRKPGNMQEPTRPGVPGSRYRRPRRHSALSSTVGTSGASDSHTSDSSNNYNTTVTTSATGTISATAETDPKGKRPIREG 405
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma08g00889 405 MobiDBLite consensus disorder prediction 354 392 - -
Gma08g00889 405 Gene3D Transferase(Phosphotransferase) domain 1 133 337 - -
Gma08g00889 405 SMART serkin_6 56 326 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma08g00889 405 Gene3D Phosphorylase Kinase; domain 1 18 131 - -
Gma08g00889 405 ProSiteProfiles Protein kinase domain profile. 56 338 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma08g00889 405 MobiDBLite consensus disorder prediction 327 405 - -
Gma08g00889 405 Pfam Protein tyrosine and serine/threonine kinase 59 325 IPR001245 GO:0004672|GO:0006468
Gma08g00889 405 PANTHER RECEPTOR-LIKE KINASE 8 381 - -
Gma08g00889 405 CDD STKc_IRAK 62 328 - -
Gma08g00889 405 ProSitePatterns Serine/Threonine protein kinases active-site signature. 177 189 IPR008271 GO:0004672|GO:0006468
Gma08g00889 405 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 8 381 - -
Gma08g00889 405 SUPERFAMILY Protein kinase-like (PK-like) 41 342 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma08g00889 Gma-Chr8 7357791 7361827 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma08g00889 44 340 Receptor kinase-like Gene Family AT4G11530 51.505 2.86e-109 334
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Gma08g00889 PK_Tyr_Ser-Thr 2.2e-51 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma08g00889 - - gmx:100795769 763.837