Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma08g00873 ATGAAAATTCTAATAATAGCCTCCGCTGTGGCCGCATCGTTGTTTCTATTATTATCATTCATCATCGGATACTTAATCTTCCGATACGTAAGAAGAGGTTCCGCTGCGGAAGATAGCAGCAACCCTGAACCTTCGAGCACGCGctgccgcaacttttctttgacggagataagagccgccaccaacaacttcgacgagggtttaatcgtgggcaaaggaggcttcggggacgtgtacaaaggccacgtccgcacgtgtcacaaacccgtggccatcaagcgcctcaaaccgggttcggaccagggcgcgaacgagttccagacggagatcaagatgctctcgcgcttccgccacgcgcacttggtctcactcatcgggtactgcaacgatggcggagaaatgatcctcgtctacgatttcatggcgcgtgggaccctacgcgaccacttgtacggttcggagctgtcgtgggagaggaggctgaacatatgtcttgaggcggcgcgtgggcttcacttcctccacgcgggcgtggacaagcagagcgtgatacaccgcgacgtgaagagcacgaacatcctgctggacaaggattgggtggcaaaagtgtcggattttgggttgtcgaaggggaagcaacggcccatgatgagcgatgttgtGGAAGGGTTGGAGTATGCATTAAATTTACAACAACGTTATAAAAAAAATAAAGGGGAAATAGGGTTGACCAAAATTGAGGATCACCATGGTGACTTTAACGACAAATTTGGGAAAGTGTTATCGATGAACGCGTCTAGCAGCACCAGCATGGCTACGACAACATGCAGTGAAGAGGAACAAGCATTGGTGCATGGGATGTTCCCTGAGCTTCGAAATCAAAGACCACGTTAA 894 0.1801 MKILIIASAVAASLFLLLSFIIGYLIFRYVRRGSAAEDSSNPEPSSTRCRNFSLTEIRAATNNFDEGLIVGKGGFGDVYKGHVRTCHKPVAIKRLKPGSDQGANEFQTEIKMLSRFRHAHLVSLIGYCNDGGEMILVYDFMARGTLRDHLYGSELSWERRLNICLEAARGLHFLHAGVDKQSVIHRDVKSTNILLDKDWVAKVSDFGLSKGKQRPMMSDVVEGLEYALNLQQRYKKNKGEIGLTKIEDHHGDFNDKFGKVLSMNASSSTSMATTTCSEEEQALVHGMFPELRNQRPR 297
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma08g00873 297 PANTHER OS07G0166700 PROTEIN 34 210 IPR045272 GO:0004714|GO:0006468
Gma08g00873 297 PANTHER RECEPTOR-LIKE PROTEIN KINASE FERONIA 34 210 - -
Gma08g00873 297 ProSiteProfiles Protein kinase domain profile. 64 297 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma08g00873 297 SUPERFAMILY Protein kinase-like (PK-like) 39 216 IPR011009 -
Gma08g00873 297 Gene3D Transferase(Phosphotransferase) domain 1 141 227 - -
Gma08g00873 297 ProSitePatterns Serine/Threonine protein kinases active-site signature. 183 195 IPR008271 GO:0004672|GO:0006468
Gma08g00873 297 SMART serkin_6 64 288 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma08g00873 297 ProSitePatterns Protein kinases ATP-binding region signature. 70 93 IPR017441 GO:0005524
Gma08g00873 297 Pfam Protein tyrosine and serine/threonine kinase 70 212 IPR001245 GO:0004672|GO:0006468
Gma08g00873 297 Gene3D Phosphorylase Kinase; domain 1 34 140 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma08g00873 Gma-Chr8 7192571 7194418 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma08g00873 16 210 Receptor kinase-like Gene Family AT3G51550 51.092 2.01e-67 224
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Gma08g00873 PK_Tyr_Ser-Thr 6.9e-33 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma08g00873 - - gmx:100792589 403.29