Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma08g00859 ATGTCAATGGCTGCTCCAAGTTCCCTATTGAAGGTGGAGGAAATACAAGGAAGAGGGAGGGGAATGGTTGCATCTCAGCCTCTTAAAGCTGGTCAAATTGTCCTCAGAGACTCTCCCATTCTGCTGTATTCGGCTTTGCCCTTGGTCAGACAGTCTCTGTCATCCTCCTCCTCCTCTGCCTCCACTTCCTGCTTCTGTGATCACTGCTTCAGAATCTTGTCTCCTTCTTTACAGGGAGATTCTTCATCATCCACAGTTTTGTGCCCCAATTGTCGCCACCATTGTTTCTGCAATTCAAATTGTCTTTCAAATGCACTGAACTCCTCCCATTCTTCTTGGGTATGTCAAGCATTATCTCATCTTAGAGCCAATTCTCTACTGCTTGAACAGCCCCTTGAGCACCAAGTCCAAGTTAATTTTCTTGTTGCTGCCTACAATCTTGCCAATATCTCCCCTTCAGATTTTCAAATTATGCTTTCTCTTCAGGGTTCTCCTGATGATTCCACCATTGCTGCAGCTCAGTTCCTACACCCCCTTATTTCATCCCTCTGCTCACTTGCTCTCATTGGCCCTCAGAATGGATTTTCTTTAGAACTCACGTCTGCTATTCTTGCCAAGGACAAGCTCAATGCCTTCGGCATAATGCAGCCATTCTCTGAACATGATGACCAGAGGTCCGTCAGAGCTTATGGTATTTACCCCTATGCCTCCTTTTTTAACCACGATTGCCTTCCCAATGCCTGCAGATTTGATTATGTGGATGCTAATCCTTCTGATGACAGCCATAATACTGACTTTATTATTAGGATGATTCATGATGTTCCCCAAGGTAGGGAGATCTGTTTGAGTTATTTCCCTGTGAATGAAAAATATTCTAGTAGGCAGAAGAGACTGATTGAAGATTATGGCTTCACCTGTAATTGTGATCGATGTAATGTGGAGTCAAATTGGTCAGATAATGATAGTGTTGAAGATAATGCTGAGGAAGAAGAGGAGGTTATGGATGAGGACCAATGTGAAACTATGGCAGCATCAGACACTGATGATCATCCCCATGAAGATAATAACGATTTCCCTCATGCTTATTTCTTTTTAAAATACATGTGTGATAGAACAAATTGCTGGGGAACTTTAGCTCCTTTACCTCCACAAGGTGATACTCCATGTAATGTCATGGAATGCAATGTCTGTGGCAAATTGAAGAGTGACAATACCTTTGATATTGATGAAGGGCAAGATGAAGTTTCCATGGAGGACTAA 1260 0.4278 MSMAAPSSLLKVEEIQGRGRGMVASQPLKAGQIVLRDSPILLYSALPLVRQSLSSSSSSASTSCFCDHCFRILSPSLQGDSSSSTVLCPNCRHHCFCNSNCLSNALNSSHSSWVCQALSHLRANSLLLEQPLEHQVQVNFLVAAYNLANISPSDFQIMLSLQGSPDDSTIAAAQFLHPLISSLCSLALIGPQNGFSLELTSAILAKDKLNAFGIMQPFSEHDDQRSVRAYGIYPYASFFNHDCLPNACRFDYVDANPSDDSHNTDFIIRMIHDVPQGREICLSYFPVNEKYSSRQKRLIEDYGFTCNCDRCNVESNWSDNDSVEDNAEEEEEVMDEDQCETMAASDTDDHPHEDNNDFPHAYFFLKYMCDRTNCWGTLAPLPPQGDTPCNVMECNVCGKLKSDNTFDIDEGQDEVSMED 419
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma08g00859 419 SMART set_7 8 291 IPR001214 GO:0005515
Gma08g00859 419 CDD SET_SMYD 220 311 - -
Gma08g00859 419 Gene3D - 65 124 - -
Gma08g00859 419 ProSiteProfiles SET domain profile. 8 285 IPR001214 GO:0005515
Gma08g00859 419 Gene3D - 129 211 - -
Gma08g00859 419 Pfam SET domain 19 284 IPR001214 GO:0005515
Gma08g00859 419 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE ASHR2 2 415 IPR044238 -
Gma08g00859 419 Gene3D SET domain 21 311 IPR046341 -
Gma08g00859 419 Coils Coil 320 340 - -
Gma08g00859 419 SUPERFAMILY SET domain 10 312 IPR046341 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma08g00859 Gma-Chr8 7038400 7041353 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Gma08g00859 SET 2.3e-11 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma08g00859 - - gmx:100783406 808.135
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma05g01377 05 35405082 35406244 Gma08g00859 08 7038400 7041353 GST