Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma08g00855 ATGGTTTTTCCAAGACCTCCTTCTGAGTCTGACCTCTTTCTTCATTCCAACTTTGCTTCTCGCTATGCCAGAGACTCTCTTCCCAGGTTCAGCATGCCCGAGGACTCCATGCCAAAGGAAGCTGCGTACCAGAACATACATGATGAGTTGCAGCTTGATGCAATTCCAAAGCTGAACTTGGCTTCCTTTGTGACCACTTCCATGGAAGAAGAGTGCAACAAACTAATCATGGAATCCATCAACAAGAACTATGTTGACATGGACGAGTATCCTATCACCACTGACCTTCACAACCGGTGTCTGAACATGATAGCACGTATGTTCCATGCTGAGATCGGAGAAAATGAGAATGCAATTGGAGCAGGAACAGTTGGATCATCAGAGGCCATAATGCTGGCAGGGCTTGCATTCAAGAAGAAGTGGCAGAACAAGCGCAAGGCAGAGGGAAAGCCTTATGATAAGCCAAATTTGGTGACTGGTTCCAATGTGCAAGTATGTTGGGAGAAATTTGCAAGGTATTTTGAGGTGGAGTTGAGGGAAGTGGAGGTCAGAGAAGGCTATTATGTCATGGACCCTGCCAAAGCCGTTGAACTTGTTGATGAGAACACTATTTGTGTGGCTGCAATCTTGGGTTCAACTTACAATGGAGAGTTCGAAGATGTCAAGCTTTTAAATGACCTGTTGCTAGAAAAAAACAAGCAAACTGGAGCTAGAATGGGATTTCAGACTCCCATGGTGAAGAGCATAAATGTTAGTGGCCACAAGTATGGGCTTGTTTATGCTGGCATTGGTTGGGTTATTTGGAGGACCAAGGATGACTTGCCAGAAGACCTTGTCTTCCATATTAACTACCTTGGAGCTGACCAACCCACCTTCACCCTCAATTTCTCTAAAGGTTCTAGTCAGATCATTGCTCAATATTATCAGCTAATTCGCCTTGGCCAAGAGGGGTACCGCAACATAATGGAGAACTGCAGAGAAAATGCGATGGTGCTGAAAGAAGATTTAGAGAAGAGTGGACACTTTAACATACTCTCAAAAGACGATGGTGTTCCTGTGGTGGCATTTTCTCTCAAAGACAGAAGCCGGTACGATGAGTTCAAGATATCAGAGATGTTGCGCCGCCACGGTTGGATCGTGCCGGCATATCCAATGCCACCAGCTGCTCAACACATCAATGTGCTCCGTGTGGTCATCAGGGCTGAGTTTTCGCGCACCCTTGCTGAACGCCTTGTGCTTGACATACACAGTGTGCTAGATGAACTTGAAAAGGTACATCCCTCCAAAGTGACCAAAAACACAAAGGAAGAGAACAAGTTATTGGTTGAAAATGGGGTGAAGAACACCGCATTGGACGCACACAGTGAAATCATTGCTCAAGAATCCAACAAGCGTCAGAAAATCATGGTTGCCTAG 1416 0.4555 MVFPRPPSESDLFLHSNFASRYARDSLPRFSMPEDSMPKEAAYQNIHDELQLDAIPKLNLASFVTTSMEEECNKLIMESINKNYVDMDEYPITTDLHNRCLNMIARMFHAEIGENENAIGAGTVGSSEAIMLAGLAFKKKWQNKRKAEGKPYDKPNLVTGSNVQVCWEKFARYFEVELREVEVREGYYVMDPAKAVELVDENTICVAAILGSTYNGEFEDVKLLNDLLLEKNKQTGARMGFQTPMVKSINVSGHKYGLVYAGIGWVIWRTKDDLPEDLVFHINYLGADQPTFTLNFSKGSSQIIAQYYQLIRLGQEGYRNIMENCRENAMVLKEDLEKSGHFNILSKDDGVPVVAFSLKDRSRYDEFKISEMLRRHGWIVPAYPMPPAAQHINVLRVVIRAEFSRTLAERLVLDIHSVLDELEKVHPSKVTKNTKEENKLLVENGVKNTALDAHSEIIAQESNKRQKIMVA 471
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma08g00855 471 SUPERFAMILY PLP-dependent transferases 16 424 IPR015424 -
Gma08g00855 471 PANTHER GLUTAMATE DECARBOXYLASE 1 470 - -
Gma08g00855 471 Pfam Pyridoxal-dependent decarboxylase conserved domain 33 359 IPR002129 GO:0016830|GO:0019752|GO:0030170
Gma08g00855 471 Gene3D - 1 65 - -
Gma08g00855 471 Gene3D - 66 338 IPR015421 GO:0003824
Gma08g00855 471 Gene3D - 339 425 - -
Gma08g00855 471 PANTHER GLUTAMATE DECARBOXYLASE 1 470 IPR010107 GO:0004351|GO:0006536|GO:0030170
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma08g00855 Gma-Chr8 7004316 7006660 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma08g00855 1 459 Calmodulin-binding Proteins AT5G17330 69.734 0.0 692
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma08g00855 K01580 - gmx:100781791 863.603