Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma08g00849 ATGGAACCTAAGCTTGAATTGTCACACTCGGCGGTAGGTGAGAATGGTGTTAGGAAGCGGAACCTGGCGACGAAACACAGCTTAGGGAGCATCCCTCTGGTGTCCAAGGAGATCACCATGGTCAAGGCCTTGGATCCGAAGAAGATGGAGGAGGCGAAGGTCAAGGTTGAAATTGGTGGGGCCCAGCACCACCGAAGCAGCGAATTAGTGTTGGTGGAGGATCTCGATATAGGAGGTGTTTTGCACGATGCTTCCGTTGTGGTTGTCAAGAATCTTCTCAACAACAAGTATCTCCGTCCACGCGCCGCCGTACGCTCTGAAATCTTCCGTCGTCTCCGCCATCTCCGCTGCCAGCCTTTCGATCTGTCATACCAAATGGCCAACAGAGTTCAAATTCCTACCAACAATTCAGCCCTCATTGCTATGATTGCAGATGAGGATACTGTAGTTGGATTTCTGTTGGCTGGAGTGGGAAATGTTGACATACGTAGGAAGACAAATTACCTCATTGTGGATTCAAAAACAACTGTCAAACAAATTGAGGATGCATTCAAAGAATTTACAACAAGGGAGGATGTTGCAATTGTGCTGATTAGCCAATATGTTGCAAATATGATAAGGTTTTTGGTTGATAGCTATAACAAGCCTGTTCCTGCAATACTTGAAATCCCTTCTAAAGACCATCCTTATGATCCAGCACATGATTCAGTTCTGTCACGAGTGAAGTATCTCTTCAATACCGAATCAGTTGCATCTGGGAGACGCTGA 768 0.4622 MEPKLELSHSAVGENGVRKRNLATKHSLGSIPLVSKEITMVKALDPKKMEEAKVKVEIGGAQHHRSSELVLVEDLDIGGVLHDASVVVVKNLLNNKYLRPRAAVRSEIFRRLRHLRCQPFDLSYQMANRVQIPTNNSALIAMIADEDTVVGFLLAGVGNVDIRRKTNYLIVDSKTTVKQIEDAFKEFTTREDVAIVLISQYVANMIRFLVDSYNKPVPAILEIPSKDHPYDPAHDSVLSRVKYLFNTESVASGRR 255
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma08g00849 255 TIGRFAM V_ATP_synt_F: V-type ATPase, F subunit 136 249 IPR005772 GO:0033180|GO:0046961|GO:1902600
Gma08g00849 255 Gene3D ATPase, V1 complex, subunit F 134 246 IPR036906 GO:0034220
Gma08g00849 255 PANTHER VACUOLAR ATP SYNTHASE SUBUNIT F 126 255 - -
Gma08g00849 255 PANTHER V-TYPE PROTON ATPASE SUBUNIT F 126 255 - -
Gma08g00849 255 Pfam ATP synthase (F/14-kDa) subunit 140 241 IPR008218 GO:0034220|GO:0046961
Gma08g00849 255 SUPERFAMILY AtpF-like 140 224 IPR036906 GO:0034220
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma08g00849 Gma-Chr8 6946671 6952320 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma08g00849 126 251 Primary Pumps ATPases(2) AT4G02620 86.508 3.67e-79 233
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma08g00849 K02151 - gmx:100305531 254.988
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma05g01363 05 35294187 35297848 Gma08g00849 08 6946671 6952320 GST