Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma08g00837 ATGTATCCTTCAAACTTGGGTGGTTCAGGTCGTGGTAATCGTCTCAATCATGCTACGGTATCTAAACTCGAAGCAATCTTCAGGGAATGCCCATATCCGAATGAAAATCGACGCCGTCAAATAAGTGAGGAGCTAGAGCTTAGTCTAAATCAAGTCAAATTTTGGTTTCAAAATAGGAAGACTAAACTAAAGGTAGTCTATTATTTTCTTTATGATGCTTCATTTTTAAGGACAATTATTTATACACTAGTTTTGTGTAATTTTCAGGCTATAAGTGAGCGAATAGATAACAATGCTCTTCGGCGTGAGAATGAAAACATACAATCAGAAAACCTATTAATGAGAGAGTCTCTGCAGAATGCATTCTGCTTATCTTGTGGGGGTCTACCCGTGGGATCAGTAGAGCGAAAACTTCAATTGCAATCATTAAAGGCAAAAAATATTCAATTAGCTAAAGAGGCAAGAGGAAGATTGCTAAACCCAATAGTTGGACTTCCTTCTCCTTATCAACATAGTCATGTTCTTAGTACTCCTGGTTTCAATCAAGATATTCCTGCTCCAGCTCCTGCTCTTGATTGCTATATTCCTGATCCTCCTAGTGATGATGTTGCACTTGATTATTGTATTCCTACTCCTGCTAGTGTTCTTGCGGTTGATCACTCTATTCCAGCTCTTGCTAGTGATCCTTGGCTTGGTCAAGATATTCCTCATCTTCCCACTCTTGCCACATTGGATCAAGATATTCCACCTCTTGGTCAAGATACTTCTACCCTTCCTCAGGATCATATGCCCAAGGATCTTGATCAAGAATTGGATGCATTGCGCGGAATTTTGAACAATGATTTGATATTCCAATCTATCATTAACCAAAGGATAGACCTGGACAATGCAATGATGTCACAAATTGCAAATAATGCAATCGAAGAGTTAATTAAGCTTTTGGATATGAACCAACCCTTCTGGTCTATACATGACTGGAAGTTAGTTCTTAAACGTGATAATTACCAAAGCATACTTGGTAGGAGACATTGCTTACCTGGACCTCATGCACGGATAGAATCCTCAAAAGATTCACGAATAGTGGACATGAATGCGGAACAACTTGTTCAAATGTTTATGAATTTGGAAAAATGGGTTGATCTGTTCCCAACAATTGTTACAAAAGCCCAAACAATTCAAGTACTCGAAAACGGTTTGGTAGGAAATCGAAGTGGAGCTTTGTTGTTGATTAATGCAGAAATGCACATTCTTTCACATTTGGTTCCAACTCGACAATTCTACTTCCTTCGTTATTGTAAACAAATTAAAGAAGGTGTGTGGGTGATAGGGGATGTGTCAATTGATTCCTTAGAATACAAAACCATTGTTCCTCGCATTTGGAGGCGTCCATCTGGATGCCTCATTCAAGAAATGAATCACGGATTGTGCAAGGTTTCTTGGGTGGAGCACGTGGAAGTGGATGATAAGATGCAAACTCACCAGCTTTTCACTGATGTTATTTGTTGCAATAATGCATATGGAGCAGAAAGATGGCTTTCGACACTTAAAAGAATGTGTGAGAGATTTGCATGCGCTTCAGCTGAAACTATACCCAGTTGTGACGAGTCTGGAGAAGCCATTTTATCACTTGAAGGAAAGAAGAGTGTGATGCACTTGGCTCATCGAATGGTTAAGACTTTTTGCCGCACTTTAGACGTGTCAGATTGTGAGAACTTCCCATATTTAACGAGGATGATGAATAATGGTGAGGTTACAATAATTGTTCGCAAGAATAACTCAGAACAAGATGTGCCACAAGGCTTGATTCTCAGTGCTGCTACCTCTTTTCTACTTCCGCACTCTCCAGAAAATGTTTTTGACTTCTTGATAGACAACAAGAAACGAGCTAAGTGGGAACCTTTTTGGTATGGAAAGCCAGGGCACGAGATTCAACGCATCTCAACTGGAAATAATCCAGGAAATTTCATTTCAATTACGAAGGCTCTTGGCCCCAGTGATAACAATATGATAGTTCTTCAAGAAAGTTATGCAGATGGTTTGGGATCTATGATGGTATACTCAGCTTTTGATACGGAGACAATGAATTTTGCCATGAGGGGAGAAGACACGTCACAGTTGTTGGTTCTTCCCTCTGGCTTTACCATATCTGGGGATGGTCATTCAAATGCTTTTGAAGGACAATCTAGACAAGTGGTGTCAAAAGGTTCATTGGTTACTCTAATGTTACAAGTTCTAGCTTCTAGTACTCCTAGCATGGACATGATAGACATGGAATTTGTAGGTTCTGTCACTACACTTGTGTCCTCAACAGTGGAGAAAATTAAAGCTGCTTTGAATTGTTCCAATTAA 2349 0.3955 MYPSNLGGSGRGNRLNHATVSKLEAIFRECPYPNENRRRQISEELELSLNQVKFWFQNRKTKLKVVYYFLYDASFLRTIIYTLVLCNFQAISERIDNNALRRENENIQSENLLMRESLQNAFCLSCGGLPVGSVERKLQLQSLKAKNIQLAKEARGRLLNPIVGLPSPYQHSHVLSTPGFNQDIPAPAPALDCYIPDPPSDDVALDYCIPTPASVLAVDHSIPALASDPWLGQDIPHLPTLATLDQDIPPLGQDTSTLPQDHMPKDLDQELDALRGILNNDLIFQSIINQRIDLDNAMMSQIANNAIEELIKLLDMNQPFWSIHDWKLVLKRDNYQSILGRRHCLPGPHARIESSKDSRIVDMNAEQLVQMFMNLEKWVDLFPTIVTKAQTIQVLENGLVGNRSGALLLINAEMHILSHLVPTRQFYFLRYCKQIKEGVWVIGDVSIDSLEYKTIVPRIWRRPSGCLIQEMNHGLCKVSWVEHVEVDDKMQTHQLFTDVICCNNAYGAERWLSTLKRMCERFACASAETIPSCDESGEAILSLEGKKSVMHLAHRMVKTFCRTLDVSDCENFPYLTRMMNNGEVTIIVRKNNSEQDVPQGLILSAATSFLLPHSPENVFDFLIDNKKRAKWEPFWYGKPGHEIQRISTGNNPGNFISITKALGPSDNNMIVLQESYADGLGSMMVYSAFDTETMNFAMRGEDTSQLLVLPSGFTISGDGHSNAFEGQSRQVVSKGSLVTLMLQVLASSTPSMDMIDMEFVGSVTTLVSSTVEKIKAALNCSN 782
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma08g00837 782 Gene3D - 299 499 IPR023393 -
Gma08g00837 782 Pfam START domain 302 521 IPR002913 GO:0008289
Gma08g00837 782 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 13 64 IPR042160 -
Gma08g00837 782 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 168 780 IPR042160 -
Gma08g00837 782 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 90 153 IPR042160 -
Gma08g00837 782 CDD START_ArGLABRA2_like 297 520 - -
Gma08g00837 782 SUPERFAMILY Bet v1-like 545 745 - -
Gma08g00837 782 CDD homeodomain 14 64 IPR001356 GO:0003677
Gma08g00837 782 ProSiteProfiles 'Homeobox' domain profile. 20 66 IPR001356 GO:0003677
Gma08g00837 782 SUPERFAMILY Homeodomain-like 14 66 IPR009057 -
Gma08g00837 782 SUPERFAMILY Bet v1-like 293 522 - -
Gma08g00837 782 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN HDG10-RELATED 13 64 - -
Gma08g00837 782 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN HDG10-RELATED 168 780 - -
Gma08g00837 782 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN HDG10-RELATED 90 153 - -
Gma08g00837 782 Gene3D - 9 66 - -
Gma08g00837 782 ProSiteProfiles START domain profile. 292 524 IPR002913 GO:0008289
Gma08g00837 782 SMART HOX_1 8 70 IPR001356 GO:0003677
Gma08g00837 782 Pfam Homeodomain 16 64 IPR001356 GO:0003677
Gma08g00837 782 SMART START_1 301 521 IPR002913 GO:0008289
Gma08g00837 782 Coils Coil 97 117 - -
Gma08g00837 782 ProSitePatterns 'Homeobox' domain signature. 41 64 IPR017970 GO:0000981|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma08g00837 Gma-Chr8 6873632 6879669 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma08g00837 8 780 Homeobox Transcription Factor Family AT1G34650 34.304 9.11e-119 372
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Gma08g00837 START 1.2e-33 CL0209
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma08g00837 K09338 - gmx:100783053 1372.84