Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma08g00826 ATGGCTGAAACTCCATCACCCTCTGAGTCTCCCACAGCCTCCTTTGGCCCCATCATAAGTAATGGCCAAGTTGGTGGCTTCGATTGGATTGTCCTTGTGGCAGCAATTTTATGTGCCTTTGTGTGTGCTCTTGGCCTCAACACAATGTTACAATGTGTGTTTCAATGTGCTTGTCGTGTCCTCACAGAGCCTCGCCAATGGATTGCTTCACGAAGGCTCAACTCTGGCCTCAAGAAAAAGGAAATGGTGGCTTTGCCAACCTCAACTTACACTACTACACACTCTGCTGCTGCCTCTTCTTCTTCTTCACCTAATTCTAGTAGTTGTGTCATTTGCTTGGCTGAGTTCTCTGATGGGGACCCTATAAGGTTCCTTCCAAAGTGCAACCACTATTTCCATGTGGTTTGCATTGACAAGTGGCTACTCTCTCACTCTTCTTGCCCTACTTGCAGGCACCTCCTCAAGTCAAATGATTCTCTTCACTCCTTACATATTGTCATAGCTTAG 507 0.4655 MAETPSPSESPTASFGPIISNGQVGGFDWIVLVAAILCAFVCALGLNTMLQCVFQCACRVLTEPRQWIASRRLNSGLKKKEMVALPTSTYTTTHSAAASSSSSPNSSSCVICLAEFSDGDPIRFLPKCNHYFHVVCIDKWLLSHSSCPTCRHLLKSNDSLHSLHIVIA 168
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma08g00826 168 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 65 156 IPR013083 -
Gma08g00826 168 PANTHER OS06G0666500 PROTEIN 24 163 - -
Gma08g00826 168 Pfam Ring finger domain 108 151 IPR001841 -
Gma08g00826 168 SMART ring_2 109 150 IPR001841 -
Gma08g00826 168 SUPERFAMILY RING/U-box 108 157 - -
Gma08g00826 168 ProSiteProfiles Zinc finger RING-type profile. 109 151 IPR001841 -
Gma08g00826 168 PANTHER RING-H2 FINGER PROTEIN ATL61-RELATED-RELATED 24 163 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma08g00826 Gma-Chr8 6808513 6809019 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma08g00826 28 154 C3H Transcription Factor Family AT2G17450 43.077 4.18e-34 117
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma08g00826 - K19040 gmx:100779286 312.383
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma05g01349 05 35173404 35173892 Gma08g00826 08 6808513 6809019 GST