Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma08g00814 ATGAAGGGCAGTGAGGCATCATCAGGAGGAGACATGAGTGTGAAGCCTGCATCTGCATGGCTTGAGAGGCTTATGGCTGAGACATTCTTTGGTGGTTGTGGGGTCCACCAGAATCACAAGAAGAACGAGAAGAACATCTTTTGCTTGCACTGTTGCCTTAGCATCTGCCCCCACTGCCTCCCTTCTCACCGCTCCCATTCCCTTCTCCAGGTGAGAAGGTATGTTTACCATGACGTGGTTCGATTGGGTGATCTGGAAAAGCTCGTCGATTGTTCCAATATTCAGCCATATACCATTAACGGTGCGAAAGTGATATTCTTAAATCAGAGGCCACAGTCAAGGTCATGCAAAGGCACTGCCAATGCTTGCTGCACTTGTGACAGGATTCTTCAGGAGCCCTTTCACTTCTGCTGTCTGTCATGCAAGTTCGAGGGTCTAAGAGTTGATTGCTATACCCAATTTGTCCCCACCTCCTCCTGCTCGAATACTGAGGCTACCAGTAACAGCATTGCCAACAACAACAACAACAAGAACACCAATGGCTTCTTCCTCTCTCTTGGAAGCAGGAGAAAGGGGGCTCCCCATAGAGCTCCACTCTCCTAG 603 0.4925 MKGSEASSGGDMSVKPASAWLERLMAETFFGGCGVHQNHKKNEKNIFCLHCCLSICPHCLPSHRSHSLLQVRRYVYHDVVRLGDLEKLVDCSNIQPYTINGAKVIFLNQRPQSRSCKGTANACCTCDRILQEPFHFCCLSCKFEGLRVDCYTQFVPTSSCSNTEATSNSIANNNNNKNTNGFFLSLGSRRKGAPHRAPLS 200
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma08g00814 200 Pfam PLATZ transcription factor 72 142 IPR006734 -
Gma08g00814 200 PANTHER OS02G0172800 PROTEIN 13 146 - -
Gma08g00814 200 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 13 146 - -
Gma08g00814 200 ProSiteProfiles Zinc finger B-box type profile. 33 71 IPR000315 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma08g00814 Gma-Chr8 6710283 6714661 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF PLATZ Gma08g00814 PLATZ 9.8e-27 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma08g00814 - - gmx:102668349 399.823
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma08g00814 08 6710283 6714661 Gma08g00814 08 6710283 6714661 ECH
Gma05g01336 05 35042940 35047628 Gma08g00814 08 6710283 6714661 GST