Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Gma08g00803 atggccgacgatccaatgcccACGCGCTGGTCTTTCCAGGACTTCAAATTGTGTTATGATGCTAAGTTTGGTAGAAAGAAAGTCGCGGAGAACGGAGATGATGCTGCCGGTAAAGCGGTCAGCAATGGAAATGGAAATTCAGTGACAGTGGCCATTGTGTCCAATGGCAACAAAAGGGCATCGGAAATGGCTGTTTATGAGCAGTTTCGAAGCGAGGGGCAGAATCAGATTCACACAAATGGCTTTGTGCCGACCCTTACAGATGAAAGGCCGCAGAAGTCTTTGCTTCCACCCTTTGAATCTGCGGAAATGCGAGCTTTAGCAGAGAGCTTAAGTAGGGATATCATTCGTGGAAGTCCAGATGTGAAGTGGGAAAGCATCAAGGGGTTAGAGAATGCCAAACGTTTACTGAAAGAGGCTGTTGTGATGCCGATTAAGTATCCCAAGTACTTCACTGGTCTGTTATCACCATGGAAGGGTATCCTCCTTTTTGGCCCACCGGGGACAGGAAAGACAATGCTTGCAAAGGCAGTTGCGACAGAGTGCAATACAACTTTTTTTAATATTTCAGCCTCATCTGTAGTCAGCAAATGGCGAGGTGATTCAGAGAAGTTAGTGAAAGTGTTATTTGAACTTGCAAGGCATCATGCACCCTCAACAATATTTCTTGACGAAATTGATGCAATCATTAGTCAACGTGGTGAAGCTCGCAGTGAACACGAAGCTAGTAGACGGTTGAAAACAGAGCTTCTCATTCAGATGGATGGTTTGACAAAGACAGATGAACTGGTTTTTGTTTTAGCGGCAACAAATCTTCCCTGGGAACTGGATGCAGCCATGCTTCGACGTCTTGAGAAGCGAATCCTTGTACCACTTCCAGAACCAGTTGCGAGAAGAGCAATGTTCGAGGAACTCCTTCCTCAACAGCCTGGCGAGGAATCGATCCCCTATGATATACTGGAGGATAAGACAGAAGGATATTCGGGATCGGATATCCGATTACTCTGTAAAGAGACAGCAATGCAACCCTTAAGACGCTTAATGTCACAACTTGAGCAGAACCAGGATGTGGTGCCTGAAGAAGAGTTGCCAAAAGTTGGGCCAATCAGATCTGAAGATATAGAGACAGCTTTGAGAAACACAAGGCCATCTGCTCATCTCCATGCCCACAAATATGACAAGTTCAATGCTGATTATGGTAGTCAAATACTACAATGA 1218 0.4442 MADDPMPTRWSFQDFKLCYDAKFGRKKVAENGDDAAGKAVSNGNGNSVTVAIVSNGNKRASEMAVYEQFRSEGQNQIHTNGFVPTLTDERPQKSLLPPFESAEMRALAESLSRDIIRGSPDVKWESIKGLENAKRLLKEAVVMPIKYPKYFTGLLSPWKGILLFGPPGTGKTMLAKAVATECNTTFFNISASSVVSKWRGDSEKLVKVLFELARHHAPSTIFLDEIDAIISQRGEARSEHEASRRLKTELLIQMDGLTKTDELVFVLAATNLPWELDAAMLRRLEKRILVPLPEPVARRAMFEELLPQQPGEESIPYDILEDKTEGYSGSDIRLLCKETAMQPLRRLMSQLEQNQDVVPEEELPKVGPIRSEDIETALRNTRPSAHLHAHKYDKFNADYGSQILQ 405
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Gma08g00803 405 PANTHER KATANIN P60 ATPASE-CONTAINING SUBUNIT A-LIKE 2 ISOFORM X1 9 403 - -
Gma08g00803 405 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 120 386 IPR027417 -
Gma08g00803 405 PANTHER AAA DOMAIN-CONTAINING 9 403 - -
Gma08g00803 405 Pfam ATPase family associated with various cellular activities (AAA) 161 291 IPR003959 GO:0005524|GO:0016887
Gma08g00803 405 CDD AAA 128 292 - -
Gma08g00803 405 Gene3D - 293 381 - -
Gma08g00803 405 Gene3D - 120 395 IPR027417 -
Gma08g00803 405 Pfam AAA+ lid domain 323 353 IPR041569 -
Gma08g00803 405 SMART AAA_5 157 294 IPR003593 -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Gma08g00803 Gma-Chr8 6572846 6579958 Wgd
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma08g00803 155 364 Calmodulin-binding Proteins AT3G56690 35.681 9.99e-32 125
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma08g00803 K07767 - gmx:100813164 806.594
       

Event-related genes


Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma05g01322 05 34890107 34898326 Gma08g00803 08 6572846 6579958 GST