Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma08g00786 ATGGCGAAAAAGGCAAAAGGGTCTCACTCTGCTTCTTCTGCCTCTGCATCTTCCCGCAAACTAGTGCTGAGGATTAAATCAAACGAGGGAATCAAGAGATCAGTGCGGCAGACTAATTCAAGAAAGAAACCCAAAGCAAAGCAAAAGAAGAACAAACAAATGTTTGATGCTATGAAACCCAAGAAACCTCCGACAGCTTTCTTCTACTTCTTGGAGGATTTTCGTAAAGAATTTCAAGAGCAGAATCCAGATGTAAAGTCAATGCGTGATATTGGCAAGGCATGTGGAGAGAAGTGGAAAACAATGACTTATGAGGAGAAGGTTCAATACTATGATATAGCAACAAAAAAACGTGAAGAATTTGATAACGCAATGGCTGAATTTAATAAGAAAATGGAAAATGGCGAGTTTGACGAAACTGATGATGAATCAGAGTTTGATGAGTAA 447 0.3893 MAKKAKGSHSASSASASSRKLVLRIKSNEGIKRSVRQTNSRKKPKAKQKKNKQMFDAMKPKKPPTAFFYFLEDFRKEFQEQNPDVKSMRDIGKACGEKWKTMTYEEKVQYYDIATKKREEFDNAMAEFNKKMENGEFDETDDESEFDE 148
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma08g00786 148 SUPERFAMILY HMG-box 47 136 IPR036910 -
Gma08g00786 148 SMART hmgende2 59 130 IPR009071 -
Gma08g00786 148 CDD HMGB-UBF_HMG-box 60 126 - -
Gma08g00786 148 Gene3D High mobility group box domain 55 144 IPR036910 -
Gma08g00786 148 Pfam HMG (high mobility group) box 60 129 IPR009071 -
Gma08g00786 148 ProSiteProfiles HMG boxes A and B DNA-binding domains profile. 60 129 IPR009071 -
Gma08g00786 148 PANTHER HIGH MOBILITY GROUP B PROTEIN 14 2 147 - -
Gma08g00786 148 PANTHER HIGH MOBILITY GROUP B PROTEIN 12-RELATED 2 147 - -
Gma08g00786 148 MobiDBLite consensus disorder prediction 1 60 - -
Gma08g00786 148 MobiDBLite consensus disorder prediction 8 22 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma08g00786 Gma-Chr8 6444858 6447979 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR HMG Gma08g00786 HMG_box 5.7e-18 CL0114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma08g00786 - - gmx:100809401 239.195
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma05g01305 05 34741751 34745144 Gma08g00786 08 6444858 6447979 GST