Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma08g00785 ATGGAAAGTCTTATCTTCAAAATTATTAGGTTTACTGGAAGTTCTTTTTCTTTCTTAAGGGAGGATTTTCGTAAAGAATTTCAAGAGCAGAATCCAGATATAAAGTCAATGTATGATATTGGCAAGGCGTGTGGAGAGAAGTGGAAAACAATGACTTATGAGAACGCATCATCTTGTACAAGATTTGCACGAACTCAGAGCGAGAGCAACAGGAGGAATTGTCTACTTTCCGCAACCAGATATGTTCTGAAGGAAATCGATCAAGCACAAATGGAACAATTACACAAGAAAATTGAGGATGACTTAGAGGTCTCAAGATTGGCAATGCATCTGGAAAGAAGTGGATATCAATGA 354 0.3757 MESLIFKIIRFTGSSFSFLREDFRKEFQEQNPDIKSMYDIGKACGEKWKTMTYENASSCTRFARTQSESNRRNCLLSATRYVLKEIDQAQMEQLHKKIEDDLEVSRLAMHLERSGYQ 117
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma08g00785 117 PANTHER HIGH MOBILITY GROUP B PROTEIN 12-RELATED 15 56 - -
Gma08g00785 117 PANTHER HIGH MOBILITY GROUP B PROTEIN 14 15 56 - -
Gma08g00785 117 CDD HMGB-UBF_HMG-box 14 54 - -
Gma08g00785 117 SUPERFAMILY HMG-box 14 54 IPR036910 -
Gma08g00785 117 Pfam HMG (high mobility group) box 14 54 IPR009071 -
Gma08g00785 117 Gene3D High mobility group box domain 14 56 IPR036910 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma08g00785 Gma-Chr8 6426999 6442185 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR HMG Gma08g00785 HMG_box 2.2e-06 CL0114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma08g00785 - - gmx:100807979 200.29