Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma08g00780 ATGGCAGCAGCTTCTTCCATGGCTCTCTCATCCCCATCCTTGGCTGGCAAGGCCGTGAAGCTGGGCCCATCAGCCCCAGAAGTGGGAAGGGTGAGCATGAGGAAGACCGTCACCAAGCAGGTCTCCTCAGGAAGCCCATGGTACGGCCCAGACCGAGTCAAGTACTTGGGCCCATTCTCTGGCGAGCCCCCGTCCTACCTAACCGGTGAGTTCCCAGGCGACTACGGCTGGGACACTGCTGGGCTTTCCGCAGACCCAGAAACCTTCGCCAAGAACCGTGAACTCGAAGTGATCCACTCCAGGTGGGCCATGCTCGGAGCCTTGGGCTGCGTCTTCCCGGAGTTGCTGTCCCGCAACGGGGTGAAGTTCGGAGAAGCCGTGTGGTTCAAGGCCGGGTCCCAGATCTTCAGCGAGGGTGGGCTCgactacttgggcaacccaagcctgatccacgcccagagcatcctcgccatctgggccacacaagttatcctaatgggtgccgttgaaggttaccgtattgctggtggccccctcggtgaggtcactgacccaatctacccaggtggcagcttcgacccattgggccttgctgatgacccagaggcttttgctgagcttaaggtgaaggaactcaagaacggacgattggccatgttctctatgtttggcttctttgttcaggccattgtcaccggaaagggtccattggagaacctcgccgatcaccttgctgaccctgtcaacaacaacgcctgggcctatgccaccaacttcgtccccggaaagtga 792 0.3295 MAAASSMALSSPSLAGKAVKLGPSAPEVGRVSMRKTVTKQVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWATQVILMGAVEGYRIAGGPLGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 263
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma08g00780 263 Pfam Chlorophyll A-B binding protein 63 229 IPR022796 -
Gma08g00780 263 Gene3D Chlorophyll a/b binding protein domain 54 256 - -
Gma08g00780 263 PANTHER CHLOROPHYLL A-B BINDING PROTEIN 3, CHLOROPLASTIC 3 263 - -
Gma08g00780 263 SUPERFAMILY Chlorophyll a-b binding protein 46 260 - -
Gma08g00780 263 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 3 263 IPR001344 GO:0009765|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma08g00780 Gma-Chr8 6403322 6404292 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma08g00780 3 263 Chloroplast and Mitochondria Gene Families AT1G29930 88.722 1.91e-171 472
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma08g00780 K08912 - gmx:100805310 533.102
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma08g00780 08 6403322 6404292 Gma08g00780 08 6403322 6404292 ECH
Gma05g01293 05 34660908 34661973 Gma08g00780 08 6403322 6404292 ECH
Gma05g01293 05 34660908 34661973 Gma08g00780 08 6403322 6404292 GST