Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma08g00775 ATGTCTGTTGAACCTAAGGAACTTTACTACCAGGACCTTGTCCTAGACCACAATATCATTAATAATCAGCATCAGGGCACAGAAGCAGGATCTAATACTACTATGTACGAAAAGCACTTTTCCTCTACCTTAATTCCTTCAGTTTCAGCAGCATATGATTCATCACAAGCCTTTGATCCCTCTTACATGAGTTTCACTGACTGTTTGCAAGGAAGCATGGACTACAACTCACTTGCAACTTCTTTTGGCCTTTCTCCTTCCTCATCTGAGGTTTTTTCTTCTGTTGAAGGGAACCAAAAGCCAGCAGAAGGAGGAGGAGAtggtggtggtggtggtggtggtagtggtggCAGTGAAACCCTTGCGACCCTTAACTCTTCTATCTCTTCTTCATCTTCTGAAGCCGGGGCTGAGGAAGATTCAGGAAAGAGCAAAAAAGAAAGGCAAGTGAAAACTGAAGAAGGAGGAGAAAACTCTAAGAAAGGGAACAAGGAGAAGAAGAAAGGAGAGAAGAAGCAAAAGGAGCCAAGGTTTGCCTTCATGACCAAGAGTGAGGTTGATCACCTTGAAGATGGATACAGATGGAGAAAATATGGACAAAAAGCTGTCAAGAATAGCCCTTACCCAAGGAGCTACTACAGGTGCACTACACAGAAGTGCACAGTGAAGAAACGCGTGGAGAGGTCATTTCAGGACCCAACCACTGTGATAACAACGTATGAAGGTCAACACAACCATCCGGTCCCCACTTCTCTCAGAGGGAATGCGGCCGCAGGAATGTTCACACCCTCTTCTTTGCTAGCCACACCAACTCATCCACTCGCAGCCGGGTCAAACTTCCCGCAAGATCTCTTCCTTCACATGCATTACCCTCGTCACCACCACCAATATCATCACATTCACAACAACCTCTTCGCCACACAATCCATGACAAATGCTACTACTGCTACTACTACAACCACCACTGCTACCATCGCTCCGTCCTCGTTTTACTCTTCCTATAACAACATTAACAACTCTCTTCTTAACAACCAGTTTCTTCCTCCAGAATACGGCCTCCTTCAAGACATAGTCCCTTCCATGTTACACAACAAGTCCCATCATAACCAGAATTAA 1116 0.4364 MSVEPKELYYQDLVLDHNIINNQHQGTEAGSNTTMYEKHFSSTLIPSVSAAYDSSQAFDPSYMSFTDCLQGSMDYNSLATSFGLSPSSSEVFSSVEGNQKPAEGGGDGGGGGGGSGGSETLATLNSSISSSSSEAGAEEDSGKSKKERQVKTEEGGENSKKGNKEKKKGEKKQKEPRFAFMTKSEVDHLEDGYRWRKYGQKAVKNSPYPRSYYRCTTQKCTVKKRVERSFQDPTTVITTYEGQHNHPVPTSLRGNAAAGMFTPSSLLATPTHPLAAGSNFPQDLFLHMHYPRHHHQYHHIHNNLFATQSMTNATTATTTTTTATIAPSSFYSSYNNINNSLLNNQFLPPEYGLLQDIVPSMLHNKSHHNQN 371
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma08g00775 371 Pfam WRKY DNA -binding domain 190 247 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gma08g00775 371 Gene3D WRKY domain 173 250 IPR036576 GO:0003700|GO:0006355|GO:0043565
Gma08g00775 371 SUPERFAMILY WRKY DNA-binding domain 181 249 IPR036576 GO:0003700|GO:0006355|GO:0043565
Gma08g00775 371 MobiDBLite consensus disorder prediction 86 178 - -
Gma08g00775 371 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 37 289 IPR044810 GO:0003700
Gma08g00775 371 PANTHER WRKY TRANSCRIPTION FACTOR 81 37 289 - -
Gma08g00775 371 MobiDBLite consensus disorder prediction 118 137 - -
Gma08g00775 371 MobiDBLite consensus disorder prediction 138 178 - -
Gma08g00775 371 SMART WRKY_cls 189 248 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gma08g00775 371 ProSiteProfiles WRKY domain profile. 184 249 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma08g00775 Gma-Chr8 6354825 6357142 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma08g00775 46 290 WRKY Transcription Factor Family AT4G18170 56.680 5.30e-75 233
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Gma08g00775 WRKY 1.6e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma08g00775 - - gmx:100816891 595.504
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma08g00775 08 6354825 6357142 Gma08g00775 08 6354825 6357142 ECH
Gma05g01289 05 34582899 34585030 Gma08g00775 08 6354825 6357142 ECH