Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma08g00774 ATGGAAAAGGAGCCTCTGCTCCCATATTTCAGCCCCAGAAAGAAGCCTCAACCATTTCCACCACTATGCCCCTTACCAGAACACGACGAAATCGTTCTTCCTATGACCCCTTCGGAATTCAAGGACCGTCTCATCTTTGGTCCTTCTCCTTCCTCTGCTTCCCCAAGAGACCCTTCACCTCTGGCTGATGCCTTAACACTCTCTTACAATTCCCCAAAATGCCCCTCCTCTTCAAACTCACAGGACTATGCATCACCGCCACTATTTGATTCCCAACAACAGCAACCGCTCAACTCTTGGCTCCTTGACCCCAATTACGAGTCATGGCGGAAAACGAACCTTCACCGATCGAAAACCGCGCCGGCCATGGCCGTGATCAGCGATTTCAACCCCCACACCGCCGTGCAAAGACCCCAGTTTGCCAGCCAGAGTATTGTCCGCCAGGGTGTTATTCTTCTTGCTCTTTATTTGGCATTAGGGGTTGTCATTTATTGGTTCAATCGTCATAATTTTACAGCCACCGAGACTCATCCTGTAGTTGATGCATTGTATTTTTGTATAGTGACAATGTGCACAATAGGGTATGGTGACATCACTCCCAATAGTACAGCCACTAAGCTTTTCTCTATATTGTTTGTGTTGGTGGGGTTTGGATTTATAGACATATTGTTGAGTGGGATGGTTAGCTATGTGCTTGATTTGCAGGAGAATCATATGTTGACGGCGGTGAAGGGGAGGAGGGGTGAGAAGGATGGAAAGTCTTATATAATTGATGTGAAGAAAGGGAGGATGAGGATTCGGTTGAAGGTGGCGCTGGCTTTGGGGGTTGTGGTGATTTGTACTGGGGTAGGTGTGGGGGTTATGCATTTTGTGGAGAAGCTTGGATGGTTGGATTCGTTTTATCTTTCGGTTATGTCGGTTACCACGGTTGGGTATGGAGACCACGCGTTCAAGACCATGCACGGTCGGATCTTTGCTGCGATTTGGTTGCTTGTGTCGACGCTTGCTGTGGCCCGGGCGTTTCTCTATCTGGCTGAGGCCAGAGTGGATAAGCGTCATAGGAGGATGGCAAAGTGGATTCTTGGTCAGGATATGACTGTTTCTGAGTTTCTAGCAGCAGACATTGACAATAATGGCTTTGTGAGtaaatcagaatatgttatatacaagctcaaggagatgggaaaagtatctgagaaggacatcatgcagTGTTTCCAATTAGAGAAGAGAGTGTCAGATTCTCAAGTTGATGGGAACTTTCTTCTTTTGGGGATTGGTAGGGATATCAGATTGTCAAAATGGCAAGCTGGTAATTTTCCCCTTACCCTCTTGTCATGA 1341 0.4504 MEKEPLLPYFSPRKKPQPFPPLCPLPEHDEIVLPMTPSEFKDRLIFGPSPSSASPRDPSPLADALTLSYNSPKCPSSSNSQDYASPPLFDSQQQQPLNSWLLDPNYESWRKTNLHRSKTAPAMAVISDFNPHTAVQRPQFASQSIVRQGVILLALYLALGVVIYWFNRHNFTATETHPVVDALYFCIVTMCTIGYGDITPNSTATKLFSILFVLVGFGFIDILLSGMVSYVLDLQENHMLTAVKGRRGEKDGKSYIIDVKKGRMRIRLKVALALGVVVICTGVGVGVMHFVEKLGWLDSFYLSVMSVTTVGYGDHAFKTMHGRIFAAIWLLVSTLAVARAFLYLAEARVDKRHRRMAKWILGQDMTVSEFLAADIDNNGFVSKSEYVIYKLKEMGKVSEKDIMQCFQLEKRVSDSQVDGNFLLLGIGRDIRLSKWQAGNFPLTLLS 446
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma08g00774 446 Pfam Ion channel 152 231 IPR013099 -
Gma08g00774 446 Pfam Ion channel 276 345 IPR013099 -
Gma08g00774 446 Gene3D - 144 244 - -
Gma08g00774 446 SUPERFAMILY Voltage-gated potassium channels 142 231 - -
Gma08g00774 446 Gene3D - 253 364 - -
Gma08g00774 446 MobiDBLite consensus disorder prediction 64 92 - -
Gma08g00774 446 SUPERFAMILY Voltage-gated potassium channels 260 366 - -
Gma08g00774 446 PRINTS Two pore domain K+ channel signature 308 317 IPR003280 GO:0005267|GO:0016020|GO:0071805
Gma08g00774 446 PRINTS Two pore domain K+ channel signature 188 216 IPR003280 GO:0005267|GO:0016020|GO:0071805
Gma08g00774 446 ProSitePatterns EF-hand calcium-binding domain. 374 386 IPR018247 -
Gma08g00774 446 PANTHER POTASSIUM CHANNEL, SUBFAMILY K 93 412 IPR003280 GO:0005267|GO:0016020|GO:0071805
Gma08g00774 446 PANTHER TWO-PORE POTASSIUM CHANNEL 3 93 412 - -
Gma08g00774 446 MobiDBLite consensus disorder prediction 43 92 - -
Gma08g00774 446 MobiDBLite consensus disorder prediction 1 23 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma08g00774 Gma-Chr8 6327618 6335180 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma08g00774 4 403 Ion Channels AT4G18160 63.504 1.25e-172 489
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma08g00774 K05389 - gmx:100804249 781.171
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma08g00774 08 6327618 6335180 Gma08g00774 08 6327618 6335180 ECH
Gma05g01288 05 34550019 34557476 Gma08g00774 08 6327618 6335180 ECH
Gma05g01288 05 34550019 34557476 Gma08g00774 08 6327618 6335180 GST