Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma08g00752 ATGGCTATTTCTTCAACTTGGTACTTGTTTCTTCCTATAATTTTATCGTTATGTCTCATAACACTATGTGGAACAGTGCTAGAAGACCTCAAAAACTTACACCAACCACCAGATTTTAACACTACAATTTTCTCCAAGTGTCTCAAGAACCCCTCTCTTAGGTACTGCAGTTCCAATCCCATGATGGACCTTGAAAAAATATTAGGATTCACTATTGTTGCAAGCTATCTCTGCAATGAACCAAAGAACCCTAATTGTGTGGAGTCATTCCCCAAAGTTGATCTTAGAAACCGACCAAACATTGCACCTCTTTATTTGTCCTTTGATTTCTTTTGGAAGTACTTTCCCTTAAGCATTATTTCCATTGACTTGTCCAACAATTCTATGAAGGGTGATTTTCCAATTGATGTTCTCCATTGCACCCAAATTCAGTCTCTTGATTTAAGTATCAATGCATTTTCTGGTGACATTCCAATTCAAAGTTTCTCTCCCCTTATCAACCTCACTTTTCTCAACCGCTCCTATAATTGCTTTTCAGAGAGTAAACTCTCTGATTCCCAATTCTCCAAAAGGTTTAACTCTTCTAGTTTTCTTCATTCTGGTGCTCTTTTGGATCAAAAAAGGCCTGATTTTCTACCAAGTAAACTTCAAAGAAGTAGGAGGTTTACACCGGCAATTCTAAAGGCAGCAATTGATGGTTTTTCAAATAAGTATTTGGTAGGAAAGAGTGATGTTGTTCACATCTACAAAGGGATCTTGAGAGATGGTACTGAAGTGAAAATTGAGATGTACTGGGATGATATACCGAGGGATAGTTACCGTAAATTTGTCGAAGAATTTAATGTTCTGTCAAAGTTACACCACAAGAACCTTTTTAGAGTTCTGGGGTGGTGTAGGAGCAGAAAATTCAGGTCCATTATAACAGAATGGACAAGAGAAGAAAATGTTGAAATGTGGCTATCGGGTCATCAGGAGCAGTTTGATGGAGGTGATGCTGGATTTATTAGGTACTTAAGAACCCTTAATCCTGCAGATTTGCAGCAAAAAATTGATGAGAGAATGGAAGTAACTGAAACAAATTTTCATCAAGTTAAACAGGCATTGTCTATAGGATTAATGTGCATAGACCAATCAAACAGTGAGAAGCCAAGCTTGGGCATGATATTTAACACTATAGCAAGAGGCTACAAGGCTAGCCTCGTGTCTGCAAATCATAGAATATCTCACGGGGAGAAATTTAAGGGACACATGCATGTTCAAACCTGA 1266 0.3791 MAISSTWYLFLPIILSLCLITLCGTVLEDLKNLHQPPDFNTTIFSKCLKNPSLRYCSSNPMMDLEKILGFTIVASYLCNEPKNPNCVESFPKVDLRNRPNIAPLYLSFDFFWKYFPLSIISIDLSNNSMKGDFPIDVLHCTQIQSLDLSINAFSGDIPIQSFSPLINLTFLNRSYNCFSESKLSDSQFSKRFNSSSFLHSGALLDQKRPDFLPSKLQRSRRFTPAILKAAIDGFSNKYLVGKSDVVHIYKGILRDGTEVKIEMYWDDIPRDSYRKFVEEFNVLSKLHHKNLFRVLGWCRSRKFRSIITEWTREENVEMWLSGHQEQFDGGDAGFIRYLRTLNPADLQQKIDERMEVTETNFHQVKQALSIGLMCIDQSNSEKPSLGMIFNTIARGYKASLVSANHRISHGEKFKGHMHVQT 421
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma08g00752 421 PANTHER LEUCINE-RICH REPEAT PROTEIN KINASE FAMILY PROTEIN 205 322 - -
Gma08g00752 421 PANTHER RECEPTOR KINASE-LIKE PROTEIN XA21 205 322 - -
Gma08g00752 421 PANTHER RECEPTOR KINASE-LIKE PROTEIN XA21 1 208 - -
Gma08g00752 421 PANTHER LEUCINE-RICH REPEAT PROTEIN KINASE FAMILY PROTEIN 323 420 - -
Gma08g00752 421 PANTHER RECEPTOR KINASE-LIKE PROTEIN XA21 323 420 - -
Gma08g00752 421 PANTHER LEUCINE-RICH REPEAT PROTEIN KINASE FAMILY PROTEIN 1 208 - -
Gma08g00752 421 Gene3D Ribonuclease Inhibitor 24 207 IPR032675 -
Gma08g00752 421 Gene3D Phosphorylase Kinase; domain 1 208 310 - -
Gma08g00752 421 SUPERFAMILY Protein kinase-like (PK-like) 210 328 IPR011009 -
Gma08g00752 421 Pfam Protein tyrosine and serine/threonine kinase 240 331 IPR001245 GO:0004672|GO:0006468
Gma08g00752 421 SUPERFAMILY L domain-like 81 183 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma08g00752 Gma-Chr8 6161957 6163641 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma08g00752 88 322 Receptor kinase-like Gene Family AT5G46330 25.362 6.19e-13 68.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_Extensin Gma08g00752 PK_Tyr_Ser-Thr 2.5e-07 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma08g00752 - - gmx:100779045 578.17
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma08g00752 08 6161957 6163641 Gma08g00752 08 6161957 6163641 ECH
Gma05g01258 05 34257336 34259032 Gma08g00752 08 6161957 6163641 GST