Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma08g00742 ATGGACTGGAGGCGCTGGACTAAGAATAAGAAGAACCACCACCACCCTCCGCCGCAGCTGCAACCGCGCTTGGAGCGCCTCAACGCCAAAAAAGGCATCAATTACCAATCACCACCTTCTCCTCCTTCCCCTTCTTCTTCTTCTTCTCACTTGGATCGCCAAACCAGCTTCCGCCTCTTCGGCTTCGACGGCGAATTCGACCGCATCTTCCAGACCCTGGGCCTCTCCGGCCCAGAAGACTTCTCCATCCCCACCGCTGACTGGGAAGCCCACAAGGCCCGCTTATCTGGGCCCACCACCACTCCTCCTCCTCACACGCTTCCTCCCACTTCCCAGATTCAAGACGATGACGTTTCGGTTCCCGCTGCGGTTTCTTCTTCCTCCCCTTGGTCTTCCGGGGAGCACTACGTGGGCAGGGGCAGTGTCGGTAGATTGAATTTGAGACACGGCGAAAGGAGCGTGCTTTTCACCGATTCCGATTCCTTCACTACTTCACACGACGATGACAGTGATGTTGGTGGAGAGAGGGAGAGAGCGGGTCTCGCTTCTAATTCTGCAGCCGCTGATGAGTTGGTTATTCCGTTTAACTCATCCAACGAGTGGTTTAGACAGACTTTCGCTTCGTGGCAGAAAGGTGACGTCTTGGGAAATGGGTCCTTCGGAACTGTCTATGAAGGCTTCAATGATGATGGATTCTTTTTTGCGGTAAAGGAGGTGTCTTTGCTGGATGAAGGTGGCCAGGGAAAACAGAGCTTTTTTCAACTTCAGCAGGAAATATCTCTTTTGAGTAAGTTTGAGCATAAAAACATAGTTCGATATTATGGCTCAAACAAGGACAAAAGTAAATTATATATATTCCTTGAGCTTATGTCAAAAGGGTCATTGGCAAGTCTCTATCAAAAGTATCGGTTAAACGATTCTCAAGTTTCTGCATACACAAGGCAGATTTTATGTGGCTTGAAGTATCTTCATGATCATAATGTGGTCCACAGGGACATCAAGTGTGCTAATATACTGGTTAATGTAAGGGGGCAAGTCAAGCTTGCAGATTTTGGGTTGGCAAAGGCAACAAAATTTAATGATATTAAATCAAGCAAAGGCTCTCCATACTGGATGGCCCCAGAGGTTGTTAACTTAAAGAATCAAGGTGGTTATGGGCTAGCAGCTGATATATGGAGCTTAGGGTGTACAGTTTTGGAGATGTTGACAAGACAGCCTCCCTATTCTGATTTGGAAGGAATGCAAGCATTATTTCGGATTGGCCGGGGTGAACCTCCACCTATTCCTGAATATTTATCTAAGGATGCCCGGGATTTCATCCTTGAATGCTTACAAGTTAACCCAAACGATCGTCCAACTGCAGCTCAGCTATTTTATCATTCTTTTCTAAGGAGAACAGTTCTATCTCCCTGA 1413 0.4735 MDWRRWTKNKKNHHHPPPQLQPRLERLNAKKGINYQSPPSPPSPSSSSSHLDRQTSFRLFGFDGEFDRIFQTLGLSGPEDFSIPTADWEAHKARLSGPTTTPPPHTLPPTSQIQDDDVSVPAAVSSSSPWSSGEHYVGRGSVGRLNLRHGERSVLFTDSDSFTTSHDDDSDVGGERERAGLASNSAAADELVIPFNSSNEWFRQTFASWQKGDVLGNGSFGTVYEGFNDDGFFFAVKEVSLLDEGGQGKQSFFQLQQEISLLSKFEHKNIVRYYGSNKDKSKLYIFLELMSKGSLASLYQKYRLNDSQVSAYTRQILCGLKYLHDHNVVHRDIKCANILVNVRGQVKLADFGLAKATKFNDIKSSKGSPYWMAPEVVNLKNQGGYGLAADIWSLGCTVLEMLTRQPPYSDLEGMQALFRIGRGEPPPIPEYLSKDARDFILECLQVNPNDRPTAAQLFYHSFLRRTVLSP 470
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma08g00742 470 MobiDBLite consensus disorder prediction 1 52 - -
Gma08g00742 470 PRINTS Tyrosine kinase catalytic domain signature 287 300 IPR001245 GO:0004672|GO:0006468
Gma08g00742 470 PRINTS Tyrosine kinase catalytic domain signature 322 340 IPR001245 GO:0004672|GO:0006468
Gma08g00742 470 PRINTS Tyrosine kinase catalytic domain signature 389 411 IPR001245 GO:0004672|GO:0006468
Gma08g00742 470 PRINTS Tyrosine kinase catalytic domain signature 432 454 IPR001245 GO:0004672|GO:0006468
Gma08g00742 470 MobiDBLite consensus disorder prediction 94 135 - -
Gma08g00742 470 Gene3D Transferase(Phosphotransferase) domain 1 207 469 - -
Gma08g00742 470 PANTHER BNAA02G34600D PROTEIN 9 467 - -
Gma08g00742 470 Pfam Protein kinase domain 210 463 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma08g00742 470 MobiDBLite consensus disorder prediction 158 177 - -
Gma08g00742 470 MobiDBLite consensus disorder prediction 110 134 - -
Gma08g00742 470 SMART serkin_6 209 463 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma08g00742 470 MobiDBLite consensus disorder prediction 162 176 - -
Gma08g00742 470 ProSitePatterns Protein kinases ATP-binding region signature. 215 237 IPR017441 GO:0005524
Gma08g00742 470 ProSitePatterns Serine/Threonine protein kinases active-site signature. 328 340 IPR008271 GO:0004672|GO:0006468
Gma08g00742 470 SUPERFAMILY Protein kinase-like (PK-like) 208 465 IPR011009 -
Gma08g00742 470 ProSiteProfiles Protein kinase domain profile. 209 463 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma08g00742 470 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 9 467 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma08g00742 Gma-Chr8 6086220 6090796 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma08g00742 23 96 MAP Kinase Kinase Kinase AT4G08500 42.353 1.52e-08 55.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Gma08g00742 Pkinase 7.7e-69 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma08g00742 - K13414 gmx:100807806 874.774
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma08g00742 08 6086220 6090796 Gma15g00464 15 3907596 3911757 PCT
Gma15g00463 15 3899050 3906235 Gma08g00742 08 6086220 6090796 PCT