Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma08g00727 ATGAAGAAGGTAAGTAATTTGTTGCATACGTTGAAACCAGACATCTTAATGGTGTTTGTGCAGATTGCATTTGCTGCTGTGAATGTGATGTACAAGCTGGCCATAAATGATGGAATGAGCATGAGGGTAGCTTCTGCATATCGCCTTGCTTTTGCTTCGGCTTTCACTGTCCCTGTGGCTCTCGTCTTTGATAGGAAGAAGAGACCAAAGATTACTTGGAGGGTGCTTTTATTGGCATTTCTGTGTGGATTGTTTGGGGGAAGTTTATTTAGTAACCTTTACCTCGAAGCCATGGCTTTGACGTCAGCAACGTTTATGTTGGCCATGGTCAACCTTATCCCTGGCATTACCTTCATTTTTGCCATATCCTTCGGATTCGAGAAGTTAAATTTGCAAGCAGCAGAAGGAAGGGCAAAGGTCATAGGCACCATAATTGGAATTAGTGGAGCAATGCTGATGACCTTTTTCAAAGGCGTAGAAATTAATATTTGGTCGTCTAATAAAATCAACCTTCTGCATCCACATCTGAACCAAAATGGGCATGTGGCATCTCACCACACTGAGTTTCGAAATAAACTGTTGGGTATTCCATGTGCCATAGTAAGCTGCTGCTTTTATTCTTTATGGTACATCACTCAGGCTAAAATGAATGCAGAATATCCAAGCCCTCACTCAAGCGCAGCTTTAATGAGCATAATGGGAGCGATACAGGCCAATATTTTTACTCTTTGTGTCGAAAGGGATTGGAGCCAATGGAAGCTGGGTTTCAATATCAGGCTTCTAACGGTGGCTTATTCGGGAATGGTGGCCTCTGGAGTAGTGGTCGTGATCATTGCCTGGTGCATAAAGAAGAGAGGCCCTCTATTTGTTTCTGTTTTCAATCCACTACAGCTTTTGTTGGTAGATATCGCTGCTTATTTAATGTTGGAAGAGAAATTGTATTTAGGAAGTGTGCTTGGAGCAGTGATAATTGTGTGCGGTCTATACACGGTGCTTTGGGGTACAGCCCAAGAATTGAAAAAGAAGTCTCAGTTAGTGCCATTAGGAAACACCAGAGGAGAGTCTGAAAATGATCGGGTGGGGAATCAGAAGCTGTTACTTATTGTTTTTCTCCATGCTGCATTGATAAGTCTTCTAAAACATTTGTACTTTATTTTGGTCATAGGGACTGAAATATGGAGAATTTATACAAAGTTGAAGCCACAGATTGTGGCAGATGATGGAATGAGCTTAAGTGTTCTTGTTGCCTACCGGTTCTTCTTTGCTTCTGCTTTCATCGTTCCGCTTGCTCTCATCTTTGAAAGGAAAAGCCTGCAATATGTTACTGGGAAAGTTCTATTCCAAGGTCTTCTTTGTGGGTTATTTGGGGGATCCTTACTACAAGGTTTCTATGTTAAATCCTTGGCCTTGACAACTGCAGTATATGTCACAGCCATGTTGAACCTCATCCCCGCTGTCACCTACATCTTGTCTGTTACTCTAAGACTTGAGAAGTCAAATCTTGGAACAGCAGGTGGGATGACCAAGTTGCTGGGGACTTTAACAGGAATCGGTGGTGCCATGATCCTCACTTTCTACAAAGGAAGAAGGCTATGCCTCTGGTCAACAAACATTGCCTTGTTGCACCGTGAGCCATCATCACACGATGCCCCCATAGGTTCTCTCTTGTTGGGCTGCATACTAGCTTTTGCAGCCGCTCTGAGTTACTCTGTGTGGTTGATAATCCAGACAAAGATGAGCGAAAAGTTTCCGTGGCACTATTCAATTGCAGCTTTAACCTCTGCAACGGCCTCAATCCTATCCGTTATATTTGCTCTTTCTACGGAGAGAGATTGGAGCCAGTGGAAGCTTGGTTGGGACTTTAGGCTTCTAACAGCAGCTTCTGCGGGTATCTTGGCCTCTGGAGTGTGTTACCCCCTTTTAGCATGGTGTGTGCGTAGGAAGGGACCTCTGTTTACATCTGCTTTTTGTCCTCTAATGTTGGTGATAGTGACCCTTTCCGAGACATTGGTACTAGATGAGTGTCTCAGCGTTGGAAGTTTAACAGGATCAGTGTTAATTGTGGGGGGATTGTACATGTTGCTGTGGGGTAAAAGCAAGGAAAAACGGATGGAACATAGTGATATAGTGTCCTCAAAAGGCACTCTTCAATGTGAAGCAATTCACAATACCGACCCATCATCTTAG 2187 0.4348 MKKVSNLLHTLKPDILMVFVQIAFAAVNVMYKLAINDGMSMRVASAYRLAFASAFTVPVALVFDRKKRPKITWRVLLLAFLCGLFGGSLFSNLYLEAMALTSATFMLAMVNLIPGITFIFAISFGFEKLNLQAAEGRAKVIGTIIGISGAMLMTFFKGVEINIWSSNKINLLHPHLNQNGHVASHHTEFRNKLLGIPCAIVSCCFYSLWYITQAKMNAEYPSPHSSAALMSIMGAIQANIFTLCVERDWSQWKLGFNIRLLTVAYSGMVASGVVVVIIAWCIKKRGPLFVSVFNPLQLLLVDIAAYLMLEEKLYLGSVLGAVIIVCGLYTVLWGTAQELKKKSQLVPLGNTRGESENDRVGNQKLLLIVFLHAALISLLKHLYFILVIGTEIWRIYTKLKPQIVADDGMSLSVLVAYRFFFASAFIVPLALIFERKSLQYVTGKVLFQGLLCGLFGGSLLQGFYVKSLALTTAVYVTAMLNLIPAVTYILSVTLRLEKSNLGTAGGMTKLLGTLTGIGGAMILTFYKGRRLCLWSTNIALLHREPSSHDAPIGSLLLGCILAFAAALSYSVWLIIQTKMSEKFPWHYSIAALTSATASILSVIFALSTERDWSQWKLGWDFRLLTAASAGILASGVCYPLLAWCVRRKGPLFTSAFCPLMLVIVTLSETLVLDECLSVGSLTGSVLIVGGLYMLLWGKSKEKRMEHSDIVSSKGTLQCEAIHNTDPSS 728
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma08g00727 728 SUPERFAMILY Multidrug resistance efflux transporter EmrE 417 528 - -
Gma08g00727 728 PANTHER WAT1-RELATED PROTEIN 402 724 - -
Gma08g00727 728 PANTHER WAT1-RELATED PROTEIN 12 342 - -
Gma08g00727 728 SUPERFAMILY Multidrug resistance efflux transporter EmrE 254 335 - -
Gma08g00727 728 SUPERFAMILY Multidrug resistance efflux transporter EmrE 47 156 - -
Gma08g00727 728 SUPERFAMILY Multidrug resistance efflux transporter EmrE 600 701 - -
Gma08g00727 728 Pfam EamA-like transporter family 194 332 IPR000620 GO:0016020|GO:0016021
Gma08g00727 728 Pfam EamA-like transporter family 557 695 IPR000620 GO:0016020|GO:0016021
Gma08g00727 728 Pfam EamA-like transporter family 12 154 IPR000620 GO:0016020|GO:0016021
Gma08g00727 728 Pfam EamA-like transporter family 409 506 IPR000620 GO:0016020|GO:0016021
Gma08g00727 728 PANTHER WAT1-RELATED PROTEIN 402 724 IPR030184 GO:0016021|GO:0022857
Gma08g00727 728 PANTHER WAT1-RELATED PROTEIN 12 342 IPR030184 GO:0016021|GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma08g00727 Gma-Chr8 5950234 5959321 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma08g00727 402 703 Nodulin-like Gene Family AT1G25270 39.414 9.07e-71 233
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma08g00727 - - gsj:114424758 1276.92
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma05g01230 05 33971047 33975106 Gma08g00727 08 5950234 5959321 GST
Gma08g00727 08 5950234 5959321 Gma15g00474 15 3989804 3991794 PCT