Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma08g00714 ATGGGAGATAACAATGTCAACCTCCCACCCGGGTTTCGCTTCTACCCCACAGATGAAGAGCTTGTTGTTCATTTCCTTCAAAGAAAGGCAAATCTTCTTCCTTGCCATCCAGATGTCATCCCTGATCTTGAACTCTACCCTTATGATCCTTGGGAACTTCATGGTAGAGCTTTGGCAGAGGGAAAGCAATGGTACTACTACAGCAGAAGGACACAAAATAGGGTCACTAGCAATGGCTATTGGATGCCAATGGGAATGGAAGAGCCAGTGATTTCAAACTCTAGCAACAAGAGAGTTGGCATGAAGAAATATTATGTGTTCCATTTGGGAGAAGCCCCTGATGGCAACACAACCAATTGGATAATGCAAGAGTATCGTCTATTAGATTCTGCTTCCTCTAGCATATCATCCAGAAGAAGATCACAACCTAAACCGGACCATAGTAAATGGGTGATATGTCGAGTTTATGAACGGGATAACGATGAAGATGATGGTGATGGAACAGAGCTCTCTTGTTTGGATGAAGTTTTCTTGTCATTGGATGATCTTGACGAAATAAGTTTGCCAAATTAG 573 0.4258 MGDNNVNLPPGFRFYPTDEELVVHFLQRKANLLPCHPDVIPDLELYPYDPWELHGRALAEGKQWYYYSRRTQNRVTSNGYWMPMGMEEPVISNSSNKRVGMKKYYVFHLGEAPDGNTTNWIMQEYRLLDSASSSISSRRRSQPKPDHSKWVICRVYERDNDEDDGDGTELSCLDEVFLSLDDLDEISLPN 190
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma08g00714 190 Gene3D NAC domain 17 163 IPR036093 GO:0003677|GO:0006355
Gma08g00714 190 PANTHER NAC DOMAIN-CONTAINING PROTEIN 104 5 187 - -
Gma08g00714 190 PANTHER NAC TRANSCRIPTION FACTOR 56 5 187 - -
Gma08g00714 190 Pfam No apical meristem (NAM) protein 9 127 IPR003441 GO:0003677|GO:0006355
Gma08g00714 190 ProSiteProfiles NAC domain profile. 8 158 IPR003441 GO:0003677|GO:0006355
Gma08g00714 190 SUPERFAMILY NAC domain 5 157 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma08g00714 Gma-Chr8 5879928 5881044 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma08g00714 1 162 NAC Transcription Factor Family AT1G61110 39.227 2.28e-41 140
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Gma08g00714 NAM 5e-29 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma08g00714 - - gmx:100788893 399.823
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma05g01212 05 33842997 33844714 Gma08g00714 08 5879928 5881044 GST
Gma08g00714 08 5879928 5881044 Gma15g00491 15 4098643 4100029 PCT
Gma15g00491 15 4098643 4100029 Gma08g00714 08 5879928 5881044 PCT