Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma08g00683 ATGGATTCTGCGTTCTCCATCAACACCACCGCGCAAGTGGCGCTCTTCAGAGCGCTCCACGGTCATCTCCACCGAGCTCCTCAACGCGCCTTGCTCCGCCGCAACCTAAAATGCCTCGTTACTTCCTATAACAGCAGCAGCAACTGCTGCCGCATTCCGTGCTCTTTCGGCTCCGTGCCGTCGCCGTCCTCGCTTCGATCCTTCCGCGGACTGCTCCCGCGAACGCCGCGCTGCATTTCGAGCTCCGCGGCTTCCTTTGCTTCTCCTGCCGGCGGTGGAAATGGCGGCGCTGGAACCGGCGACGGTGACGGAGGTGGCGGTTCTGGCGGTGAGTCTGGAGATGCTAATCTCAAACTGGTAGGAGACGCGTCTCAGGAGCTTTCCGCACTTTCGCCTGATGTTATCATTCTCGATGTTTCGGGAATGGTATGTGGGGGATGTGCGGCGACTGTGAAAAGGATACTGGAAAATCAACCACAAGTGTCATCTGCTAGTGTAAATTTAACAACAGAGACAGCAATAGTTTGGCCTGTATCTGAAGCAaaaaatgcaccaaattggcaaaagcaattaggggaggcacttgctgagcatttaactagttgtggctataattctagccttcgagACTCAACAAGAGACAACTTCCTCCAAATTTTTGAAAGGAAGATGGAGGAAAGACATAGACAATTAAGAGAAAGTGGTCGTGAGCTAGCTGTTTCTTGGGCTCTATGCGCTGTCTGCCTTGTTGGCCATTTCTCTCATTTCTTTGCAGCAAAGGCACCATGGATCCATGTATTTCATTCCATTGGGTTTCATCTTTCGTTGTCTTTGTTTACGTTGCTTGGTCCTGGCCGCCAACTTATCCTTGATGGCTTAAAAAGCCTTCTTAAAAGGACGCCAAACATGAACACCTTAGTTGGTCTCGGGGCTTTATCATCATTTACAGTCAGTTCATTTGCTGCCTTGCTGCCAAAATTGGGTTGGAAGGCCTTCTTTGAGGAACCAATTATGCTAATTGCATTTGTCTTGTTAGGAAGGAATCTCGAACAGAGAGCTAAGATTAAAGCAGCCAGTGATATGACAGGACTTCTTAGTTTATTGCCACCAAAAGCTCGCCTTCTTTTGAACAATGGGGAAACAGAGGTTGGCTCGGTTGTTGAAGTTCCTTCTGACAGTCTTTCTGTTGGAGACCAAATTATTGTATTACCTGGAGATCGTATTCCAGCTGATGGAGTTGTGAGATCTGGTAGAAGCACTGTAGACGAATCAAGTTTTACTGGTGAACCACTGCCTGTAACAAAAGTACCTGGGAGTGAGGTAGCAGCTGGGAGTATAAATCTTAATGGAACTCTTACAATGGAAGTGCAGAGACCAGGTAGTGAGACTGCTATGGCAAACATTGTTCGTCTAGTTGAAGAGGCACAAAGTAGGGAAGCTCCTGTGCAGCGGTTGGCTGACAAGGTGGCTGGACACTTCACTTATGGAGTGATGGCAACCTCTGCTGCCACATTCACATTCTGGAGTCTGTATGGCACACACATTTTACCTCCTGCTTTATatcaaggacgtgcagtttcactggctttgcagcttgcttgcagtgttctgGTTGTTGCTTGTCCATGTGCACTTGGGTTAGCCACACCTACTGCAGTGCTGGTTGGAACATCTTTGGGAGCTAAGAGAGGATTACTTCTTCGTGGTGGAAACATTCTAGAGAAGTTTGCCATGGTAGACACTGTTGTGTTTGACAAAACAGGGACCCTCACGGTTGGTAGACCTGTTGTGACAAACATTGTCATTCCTATTTGCATAAAAAATGCAATTTCAAGCCAAACTGAAGAAAATGCTTTGTCTGATGTTGAAGTTCTAAGGTTAGCAGCTGCAGTAGAAACAAATTCAGTACATCCAGTTGGTAAAGCGATTGTGGATGCTGCTCAGGCTGCTAATTGTCATAATGCTAAGGTAAAAGATGGAACATTCCTGGAAGAACCTGGATCTGGTGCTGTGGCAACAATTTATGACAAAAAGGTTTCTGTTGGGACATTAGAATGGATTACCAGGCATGGAGTTATTAACAGTATACATCAAGAAGTGGAGAAGAGTAATAATCAATCCTTTGTCTATGTTGGAGTTGATGATACTTTAGCTGGCCTAATTTATTTTGAAGATGAGATAAGGGAAGACGCAAGAGACGTTGTTGATAGATTGTCAAAGCAAAATATAGGTGTATACATGCTATCAGGAGACAAGAGGAATGCTGCTGAGCATGTTGCGTCCCTTGTTGGAATTCCCAAAGAGAAGgtgctatctgaagtaaaaccagatgagaaaaagaagttcataaatgaactacagaaagataacaacattgtagcaATGGTTGGTGATGGAATTAACGATGCAGCTGCCCTGGCTTCTTCACATGTTGGTATTGCATTAGGTGGAGGTGTCGGGGCTGCTAGTGAGGTGTCTTCTATTGTATTAATGCGCAACCAGCTCTCACAGATAGTTGATGCCTTGGAGCTTAGCAGACTGACCATGAATACTATAAAACAAAATCTTTGGTGGGCTTTCATATACAACATTGTAGGAATTCCAATTGCAGCTGGAGTGTTATTTCCCATAAATGGGACTGTGCTAACTCCATCAATTGCAGGGGCACTCATGGGGTTGAGCTCCATTGGCGTAATGACTAACTCGTTACTTTTGAGATTCAAATTTTCGTCAAAGCAGAAGCAAATACATAGCATATCGCCAAAGACCAAAATCCATGTGGCCCAAAATCAGAAAACAAACCACCCTTATTAG 2814 0.4225 MDSAFSINTTAQVALFRALHGHLHRAPQRALLRRNLKCLVTSYNSSSNCCRIPCSFGSVPSPSSLRSFRGLLPRTPRCISSSAASFASPAGGGNGGAGTGDGDGGGGSGGESGDANLKLVGDASQELSALSPDVIILDVSGMVCGGCAATVKRILENQPQVSSASVNLTTETAIVWPVSEAKNAPNWQKQLGEALAEHLTSCGYNSSLRDSTRDNFLQIFERKMEERHRQLRESGRELAVSWALCAVCLVGHFSHFFAAKAPWIHVFHSIGFHLSLSLFTLLGPGRQLILDGLKSLLKRTPNMNTLVGLGALSSFTVSSFAALLPKLGWKAFFEEPIMLIAFVLLGRNLEQRAKIKAASDMTGLLSLLPPKARLLLNNGETEVGSVVEVPSDSLSVGDQIIVLPGDRIPADGVVRSGRSTVDESSFTGEPLPVTKVPGSEVAAGSINLNGTLTMEVQRPGSETAMANIVRLVEEAQSREAPVQRLADKVAGHFTYGVMATSAATFTFWSLYGTHILPPALYQGRAVSLALQLACSVLVVACPCALGLATPTAVLVGTSLGAKRGLLLRGGNILEKFAMVDTVVFDKTGTLTVGRPVVTNIVIPICIKNAISSQTEENALSDVEVLRLAAAVETNSVHPVGKAIVDAAQAANCHNAKVKDGTFLEEPGSGAVATIYDKKVSVGTLEWITRHGVINSIHQEVEKSNNQSFVYVGVDDTLAGLIYFEDEIREDARDVVDRLSKQNIGVYMLSGDKRNAAEHVASLVGIPKEKVLSEVKPDEKKKFINELQKDNNIVAMVGDGINDAAALASSHVGIALGGGVGAASEVSSIVLMRNQLSQIVDALELSRLTMNTIKQNLWWAFIYNIVGIPIAAGVLFPINGTVLTPSIAGALMGLSSIGVMTNSLLLRFKFSSKQKQIHSISPKTKIHVAQNQKTNHPY 937
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma08g00683 937 CDD HMA 137 204 IPR006121 GO:0046872
Gma08g00683 937 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 633 875 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Gma08g00683 937 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 385 603 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Gma08g00683 937 Gene3D - 594 727 IPR023299 GO:0000166
Gma08g00683 937 SFLD p-type atpase 566 846 IPR044492 -
Gma08g00683 937 SUPERFAMILY HAD-like 581 902 IPR036412 -
Gma08g00683 937 TIGRFAM ATPase-IB1_Cu: copper-translocating P-type ATPase 285 906 - -
Gma08g00683 937 Pfam haloacid dehalogenase-like hydrolase 579 808 - -
Gma08g00683 937 SUPERFAMILY Calcium ATPase, transmembrane domain M 334 882 IPR023298 -
Gma08g00683 937 Gene3D - 134 211 - -
Gma08g00683 937 SUPERFAMILY Calcium ATPase, transduction domain A 384 472 IPR008250 -
Gma08g00683 937 CDD P-type_ATPase_Cu-like 236 907 - -
Gma08g00683 937 Gene3D - 574 846 IPR023214 -
Gma08g00683 937 PRINTS Copper-transporting ATPase signature 288 307 - -
Gma08g00683 937 PRINTS Copper-transporting ATPase signature 336 355 - -
Gma08g00683 937 PRINTS Copper-transporting ATPase signature 566 581 - -
Gma08g00683 937 PRINTS Copper-transporting ATPase signature 773 790 - -
Gma08g00683 937 PRINTS Copper-transporting ATPase signature 830 844 - -
Gma08g00683 937 SUPERFAMILY HMA, heavy metal-associated domain 135 206 IPR036163 GO:0046872
Gma08g00683 937 PANTHER ATP7, ISOFORM B 109 907 - -
Gma08g00683 937 Gene3D - 353 476 - -
Gma08g00683 937 PRINTS P-type cation-transporting ATPase superfamily signature 422 436 - -
Gma08g00683 937 PRINTS P-type cation-transporting ATPase superfamily signature 583 597 - -
Gma08g00683 937 PRINTS P-type cation-transporting ATPase superfamily signature 719 730 - -
Gma08g00683 937 PRINTS P-type cation-transporting ATPase superfamily signature 741 751 - -
Gma08g00683 937 PRINTS P-type cation-transporting ATPase superfamily signature 796 815 - -
Gma08g00683 937 PRINTS P-type cation-transporting ATPase superfamily signature 819 831 - -
Gma08g00683 937 TIGRFAM ATPase-IB_hvy: heavy metal translocating P-type ATPase 303 905 IPR027256 GO:0006812|GO:0016021|GO:0019829
Gma08g00683 937 MobiDBLite consensus disorder prediction 83 117 - -
Gma08g00683 937 Pfam Heavy-metal-associated domain 137 204 IPR006121 GO:0046872
Gma08g00683 937 ProSiteProfiles Heavy-metal-associated domain profile. 134 208 IPR006121 GO:0046872
Gma08g00683 937 ProSitePatterns E1-E2 ATPases phosphorylation site. 585 591 IPR018303 -
Gma08g00683 937 Pfam E1-E2 ATPase 367 563 - -
Gma08g00683 937 ProSitePatterns Heavy-metal-associated domain. 139 168 IPR017969 GO:0046872
Gma08g00683 937 SFLD C1.7: P-type atpase like 566 846 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma08g00683 Gma-Chr8 5655703 5671152 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma08g00683 285 906 Primary Pumps ATPases AT1G63440 39.465 8.61e-125 400
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma08g00683 K17686 - gmx:100777857 1737.62
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma05g01185 05 33507753 33556879 Gma08g00683 08 5655703 5671152 GST