Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma08g00678 ATGGATAGTCTTTGTTGCTTCAGCTCTTTCAGTCAGGTGGTTGGAGGGCGTTCTTCATGTAACTCTGGCAAAGGCAAGAGCAGTCAGTCCTCAGTCAAGTATGGCTATAGCCTAGTTAAAGGGAAAGCAAACCACCCGATGGAGGACTATCACGTAGCAAAATTTGTCCAGTTCGAAGGGCGAGAGCTTGGGCTTTTTGCTATATATGATGGACACCTGGGTGACAGTGTACCAGCCTATTTACAAAAGCATCTGTTTTCTAACATCTTGAAGGACGAGGACTTCTGGAATGATCCATTCATGTCCATTTCTAATGCATATGAGACAACAGATCAGGCAATTCTTTCTCACAGTCCTGATTTGGGGCGAGGAGGATCAACTGCAGTAACTGCAATTCTCATAAATAATCAGAAATTATGGGTAGCCAATGTTGGAGATTCACGAGCTGTTGTTTCAAGGGGAGGGGTGGCTGGACAGATGTCAACTGATCATGAACCCAATACTGAGCGGGGCAGCATTGAGACCAGAGGTGGCTTTGTCTCAAACATGCCAGGAGATGTTGCAAGAGTGAATGGGCAGCTAGCAGTTTCTCGAGCTTTCGGAGACAAAAACCTCAAAACGCACTTGCGATCTGATCCTGACATTCAGTATACTGACATTACCCCAGATGTTGAGCTTTTGATACTTGCTAGTGATGGTCTATGGAAGGTAATGGCAAACCAAGAAGCTGTTGATGTTGCAAGAAGGATAAAGGATCCACAAAAGGCAGCGAAACAACTAGCCACTGAGGCATTGAACAGAGACAGTAAGGATGATATTTCCTGCATTGTAGTTCGTTTCAAGGGTTGA 849 0.4499 MDSLCCFSSFSQVVGGRSSCNSGKGKSSQSSVKYGYSLVKGKANHPMEDYHVAKFVQFEGRELGLFAIYDGHLGDSVPAYLQKHLFSNILKDEDFWNDPFMSISNAYETTDQAILSHSPDLGRGGSTAVTAILINNQKLWVANVGDSRAVVSRGGVAGQMSTDHEPNTERGSIETRGGFVSNMPGDVARVNGQLAVSRAFGDKNLKTHLRSDPDIQYTDITPDVELLILASDGLWKVMANQEAVDVARRIKDPQKAAKQLATEALNRDSKDDISCIVVRFKG 282
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma08g00678 282 ProSiteProfiles PPM-type phosphatase domain profile. 33 280 IPR001932 -
Gma08g00678 282 PANTHER PROTEIN PHOSPHATASE 2C-LIKE PROTEIN 1 281 - -
Gma08g00678 282 SUPERFAMILY PP2C-like 28 281 IPR036457 -
Gma08g00678 282 PANTHER PROTEIN PHOSPHATASE 2C 1 281 IPR015655 GO:0004722|GO:0006470
Gma08g00678 282 SMART PP2C_4 29 278 IPR001932 -
Gma08g00678 282 CDD PP2Cc 32 280 IPR001932 -
Gma08g00678 282 Gene3D - 17 282 IPR036457 -
Gma08g00678 282 Pfam Protein phosphatase 2C 42 273 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma08g00678 Gma-Chr8 5611077 5619652 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma08g00678 1 281 PP2C-type Phosphatase Gene Family AT1G22280 70.732 1.13e-147 413
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma08g00678 K17506 - gmx:100776795 536.954
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma05g01179 05 33447005 33455510 Gma08g00678 08 5611077 5619652 GST
Gma08g00678 08 5611077 5619652 Gma15g00516 15 4297397 4302319 PCT
Gma15g00516 15 4297397 4302319 Gma08g00678 08 5611077 5619652 PCT