Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma08g00670 ATGGCGTCCCTTCTCTCATCTAATTCACCTGCTCTTAGTCATTATGAAATTAACCCTAGCTCAAGATTTGAGGCTACTACTTTGGAGATAGAAGAAACATGTAGTGCTCCAAAACCAAAAGGGACCAAAGGAGGAGAAACTTCAGGTAGTTGGAATAATAATGAGAGAGAAGAGATGGGTATGTGCTTGACATGGAAGGATGTATGGGTGACTGCTTCTGTGGGAAAGAATGAGATGAGCAAATCAATTCTTGAGGGTCTAACTGGTTATGCCAAGCCAGGGCAACTCTTGGCCATAATGGGTCCTTCTGGCTGTGGAAAATCTGCACTTCTTGATACCTTAGCAGGGAGACTAGGTTCCAACACAAGGCAAACGGGGGAGATTCTGATCAACGGGAGGAAACAAGCACTGGCATATGGAACCTCAGCATATGTCACACAAGATGATACATTACTGACAACCTTAACTGTTGGAGAAGCAGTGCACTATTCAGCCCAACTCCAATTACCAGATACCATGTCCAAAGAAGAGAAGAAAGAGAGAGCAGATTTCACAATCAGAGAAATGGGTCTTCAAGATGCCATTAACACAAGAATTGGAGGGTGGGGTGTTAAAGGAATCAGTGGGGGCCAGAAGAGGAGAGTGAGCATTTGCATTGAGATTCTAACACGACCAGGACTTCTCTTCCTTGATGAACCAACTAGTGGACTTGATAGTGCAGCTTCCTATTATGTCATGAAAAGAATTGCTACCCTTGATAAAAAAGATGATGTTCACAGAACTGTTATTGCCTCAATCCATCAACCTAGTAGTGAAGTTTTTCAACTTTTCGACAACCTTTGTCTTCTGTCTTCAGGTAGAACTGTTTACTTTGGACCTGCTTCCGCTGCAAAAGAGTTTTTTGCTTCAAATGATTTTCCTTGTCCTCCTCTCATGAATCCATCTGATCATTTACTGAAAACCATAAACAAGGATTTTGATCAGGACACTGAGTTGAATTTACAAGGAACAGAAACAATACCCACCGAAGAAGCAATTCGCATCCTTGTAAATTCATACAAGTCATCTGAAATGAACCAAGAAGTTCAGAAACAAGTGGCAATACTAACTGAAAAGAGCACCAGTTCAACAAACAAGAGAAGGCATGCTGGCTTCCTTAATCAGTGCTTTGCTCTAACCAAAAGATCTTGCGTTAACATGTATCGTGATCTAGGCTATTACTGGTTTCGCCTTGCCATTTATATTGCATTGGCTATAAGTTTAGCCACTATTTTCTGTGATCTGGGTTCAAGTTATCGCTCAATTCAGGAAAGAGGTTCATTTCTTATGTTTGTGTCTTCATTCATGACTTTCATGACCATTGGTGGATTCCCTTCCTTTGTGGAGGATATGAAGTCCAGGTGTTTGAACGAGAAAGACTAA 1422 0.4135 MASLLSSNSPALSHYEINPSSRFEATTLEIEETCSAPKPKGTKGGETSGSWNNNEREEMGMCLTWKDVWVTASVGKNEMSKSILEGLTGYAKPGQLLAIMGPSGCGKSALLDTLAGRLGSNTRQTGEILINGRKQALAYGTSAYVTQDDTLLTTLTVGEAVHYSAQLQLPDTMSKEEKKERADFTIREMGLQDAINTRIGGWGVKGISGGQKRRVSICIEILTRPGLLFLDEPTSGLDSAASYYVMKRIATLDKKDDVHRTVIASIHQPSSEVFQLFDNLCLLSSGRTVYFGPASAAKEFFASNDFPCPPLMNPSDHLLKTINKDFDQDTELNLQGTETIPTEEAIRILVNSYKSSEMNQEVQKQVAILTEKSTSSTNKRRHAGFLNQCFALTKRSCVNMYRDLGYYWFRLAIYIALAISLATIFCDLGSSYRSIQERGSFLMFVSSFMTFMTIGGFPSFVEDMKSRCLNEKD 473
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma08g00670 473 Pfam ABC transporter 86 235 IPR003439 GO:0005524
Gma08g00670 473 Gene3D - 65 331 IPR027417 -
Gma08g00670 473 PANTHER WHITE-BROWN-COMPLEX ABC TRANSPORTER FAMILY PROTEIN 21 469 - -
Gma08g00670 473 PANTHER ABC TRANSPORTER G FAMILY MEMBER 11 21 469 - -
Gma08g00670 473 Pfam ABC-2 type transporter 267 379 IPR043926 GO:0140359
Gma08g00670 473 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 81 301 IPR027417 -
Gma08g00670 473 SMART AAA_5 93 287 IPR003593 -
Gma08g00670 473 ProSitePatterns ABC transporters family signature. 207 221 IPR017871 GO:0005524
Gma08g00670 473 MobiDBLite consensus disorder prediction 33 54 - -
Gma08g00670 473 Pfam ABC-2 type transporter 388 464 IPR013525 GO:0016020|GO:0140359
Gma08g00670 473 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 63 310 IPR003439 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma08g00670 Gma-Chr8 5552377 5558497 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma08g00670 83 239 Calmodulin-binding Proteins AT2G36910 31.481 1.33e-09 58.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma08g00670 K05681 - gmx:100794527 897.501