Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma08g00667 ATGGCTTGCCTTCATGATCAGTCTCTTTCATCTGCCCCTAGATGTGCTTATGAAACTAAACCCAGTTCAAAATCAGTACTCCAGCAAAATGTCATAGACATTGAAGCCACCACACTAGAAATGGAAGCTTTTAGAGGTCCAAGAAAGATCAATAGAGAAGAAGGTATCTGCTTGACATGGAAGGATGTATGGGTGACTGCTTCTAATAGAAAGAGTGGAAGCATATCAATTCTTAAGGGTCTAACTGGTTATGCCAAGCCAGGGCAGCTCTTGGCCATCATGGGTCCTTCTGGCTGTGGCAAATCCACACTACTTGATACTTTAGCAGGGCGACTAGGTTCAAACACAAGGCAAACCGGGGAGATTCTGATCAATGGACATAAACAATCGCTGGCTTATGGAACCTCTGCATATGTCACACAAGATGATACCTTGTTAACAACCTTAACGGTCAGAGAAGCAGTGCACTATTCAGCTCAACTCCAATTACCAGACACCATGTCCAAAGAAGAGAAGAAAGAGAGAGCAGATTTCACAATCAGAGAAATGGGTCTTCAAGATGCCATTAACACAAGAATTGGAGGGTGGGGTTGTAAAGGAATCAGTGGGGGTCAGAAGAGGCGAGTTAACATCTGCATAGAGATCCTAACCCGCCCTAAACTTCTCTTTCTTGATGAACCAACTAGTGGACTTGATAGTGCAGCTTCCTATTATGTCATGAGAAGAATTGCTACCTTGGCTCAGAATGACCTCATTCAGAGGACTGTTATTGCTTCTATCCACCAGCCTAGTAGTGAAGTTTTTCAATTTTTCAATAACCTTTGTCTTTTGTCATCAGGTAAAGCAGTTTACTTTGGACCTGCTTCTGGTGTAAGTGAGTTTTTCGCTTCAAATGGTTTTCCCTGTCCTGTTCTCATGAATCCTTCTGATCATTTTCTGAAAACTATAAACAAGGATTTCGATCAGGACATTGAGGTGGATATATCGGGGAATAGAAAAATACCCACAGAAGAAGCAATCCACATTCTTGATATTAGTTCAATAGACTGGAAGAGAGGGCATGCGGGCTTCCTTAATCAATGCCTAGTTCTTACTAAAAGATCGTTCGTGAACATGCGTCGTGATCTAGGCTATTACTTGTTACGCCTTGCCATATTTGTTGCATTGGCAATAGCTTTGGCCACTATTTTCTATGATTTGGGTACAAGTTACGTCTCAATTCAGGATCGAGGTTCACTTGTTGCATTTATTAATGGATTCCTAACTTTCATGACCATTGGTGGATTCCCTTCCTTTGTGGAAGTCATGAAGGTATTTCAACGAGAAAGGCAAAATGGGCATTATGGTGTCACTGCATTCGTCATTGGGAACACCTTGTCGTCGATTCCATACTTGTTATTGATTACAATTATTCCTGGGGCTATAGCTTATTACCTTCCTGGTCTTCATAATGGATGCGAGCACTTTCTGTATTTCATTTGTGTTTTATTTTCTAGTCTCATGTTAGTGGAGAGTCTTATGATGATAGTTGCGAGCGTTGTTCCCAACTTTCTAATGGGTATCATGACTGGTGCTGGAATTCTAGGAATCATGCTTTTACTTGGCGGGTTCTTTAAATTGCCACATGATATTCCTATCCCGGTTTGGAGATACCCATTACACTTTGTTGCTTTTCACACGTTTGCCAACCGTGGAATGTTCAAGAACGAGTACGAAGGACTAAGATTTGCTTCCAATGAAGTTGGAGGAGGTTACATAAGCGGTGAAGAGGTTTTGAGATATGCATGGCAAGTTGACATGAGTTACTCAAAGTGGGTTGATCTTGCAATCTTGATAGGGATGATTTTTCTTTATCGAGTTTTGTTTTTGGTTATCATCAAGGTTAAAGAGAAGGTGAGGCCCGTTGTTGTATCATTATCATGTATGTCAGCGTCTTCCAAGCGAACAATACAAGTCATGGAAAATCCCAACGCCACTCCTTTACATTGA 1989 0.4133 MACLHDQSLSSAPRCAYETKPSSKSVLQQNVIDIEATTLEMEAFRGPRKINREEGICLTWKDVWVTASNRKSGSISILKGLTGYAKPGQLLAIMGPSGCGKSTLLDTLAGRLGSNTRQTGEILINGHKQSLAYGTSAYVTQDDTLLTTLTVREAVHYSAQLQLPDTMSKEEKKERADFTIREMGLQDAINTRIGGWGCKGISGGQKRRVNICIEILTRPKLLFLDEPTSGLDSAASYYVMRRIATLAQNDLIQRTVIASIHQPSSEVFQFFNNLCLLSSGKAVYFGPASGVSEFFASNGFPCPVLMNPSDHFLKTINKDFDQDIEVDISGNRKIPTEEAIHILDISSIDWKRGHAGFLNQCLVLTKRSFVNMRRDLGYYLLRLAIFVALAIALATIFYDLGTSYVSIQDRGSLVAFINGFLTFMTIGGFPSFVEVMKVFQRERQNGHYGVTAFVIGNTLSSIPYLLLITIIPGAIAYYLPGLHNGCEHFLYFICVLFSSLMLVESLMMIVASVVPNFLMGIMTGAGILGIMLLLGGFFKLPHDIPIPVWRYPLHFVAFHTFANRGMFKNEYEGLRFASNEVGGGYISGEEVLRYAWQVDMSYSKWVDLAILIGMIFLYRVLFLVIIKVKEKVRPVVVSLSCMSASSKRTIQVMENPNATPLH 662
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma08g00667 662 Pfam ABC-2 type transporter 360 571 IPR013525 GO:0016020|GO:0140359
Gma08g00667 662 Pfam ABC transporter 78 229 IPR003439 GO:0005524
Gma08g00667 662 SMART AAA_5 87 276 IPR003593 -
Gma08g00667 662 Gene3D - 58 302 IPR027417 -
Gma08g00667 662 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 58 304 IPR003439 GO:0005524
Gma08g00667 662 PANTHER WHITE-BROWN-COMPLEX ABC TRANSPORTER FAMILY PROTEIN 1 662 - -
Gma08g00667 662 PANTHER ABC TRANSPORTER G FAMILY MEMBER 11 1 662 - -
Gma08g00667 662 Pfam ABC-2 type transporter 261 317 IPR043926 GO:0140359
Gma08g00667 662 ProSitePatterns ABC transporters family signature. 201 215 IPR017871 GO:0005524
Gma08g00667 662 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 58 295 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma08g00667 Gma-Chr8 5529292 5533481 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma08g00667 75 265 Calmodulin-binding Proteins AT2G36910 28.283 5.57e-10 60.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma08g00667 K05681 - gmx:100785858 1021.92
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma08g00667 08 5529292 5533481 Gma08g00667 08 5529292 5533481 ECH