Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma08g00666 ATGAGCTCTATACTTCAACCTAATGCTAGTGATTGTGAATCAAACAATAGCTCAAAAATTCTGCCACCCCTTTTAGAATTTGATACCTCATTTGAGGTAGAATTAGAAAGGATCAAATCAGTAGAAACTGGTAAAGATGGTGAGGAAGATCAAGAGGAGGGTGTTTTCTTGACGTGGGAGGACTTGTGGGTGACAGTTTCAAATGGAAAAAATGGAAGGAAACCAATACTTCAGGGTCTAAAAGGCTATGCCAAACCAGGGAAACTCTTGGCCATAATGGGTCCCTCTGGCTGTGGCAAGTCAACACTTCTTGATGCTTTAGCAGGAAGGTTAGGTTCAAAGACAAAGCAAACAGGGAAGATCCTAATCAATGGCAGGAAACAAGCATTAGCTTATGGAGCATCTGCATATGTAACAGAAGATGATACTATTTTGACAACTCTAACGGTTAAAGAAGCAGTATACTACTCAGCTAACCTTCAATTGCCAGATTCCATGTCAAAGTCAGAAAAACAGGAGAGAGCAGATTTCACAATCAGAGAAATGGGTCTGCAAGATGCCATTAACACCAGAATTGGAGGGTGGGGATCTAAAGGCGCTAGTGGCGGGCAAAAGAGGAGAGTTAGCATTTGCATTGAGATCTTAACACATCCCAGGCTTCTCTTCCTTGATGAACCCACTAGTGGACTTGATAGTGCAGCTTCTTATCATGTGATGAGTAGAATATCCAACTTGAACAAAAAGGATGGCATTCAAAGGACTATTATTGCATCAATCCATCAGCCAAGTAATGAAATTTTTAAACTTTTTCCCAACCTTTGCCTTCTCTCTTCTGGGAAAACAGTTTACTTTGGACCTACTTCTGCTGCAAACAAGTTTTTCTCATCAAATGGTTTTCCATGCTCAAGTCTTCATAGTCCTTCTGATCACTTCGTAAAAACCATTAACAAGGATTTTGAACGGGACCCAGAGAAAGGAATAGCTGGAGGGCTAAGCACAGAAGAAGCAATTCATGTTCTTGCAAAATCATATGATTCATCTGAGATTTGTCACCAAGTTCAAAATGAAATAGCCCAAATAAAGAAAAGGGACTCGGACGCAATGGATAAGAAATGCCATGCTGACTTTTCAACTCAATGCCTCATTCTTACAAGAAGATCTTTTCTGAACATGTACCGCGAAGTAGGCTATTACTGGTTACGCCTACTCATCTATGGTGCCTTGGCATTAAGTCTTGGTACCTTGTTCTTTGACATTGGTTCAAGCAGTGAATCAATTCAGGCCAGAGGTTCACTGCTTGTGTTTGTTGTTACATTCCTGACCTTCATAACTGTTGGAGGTTTCCCTTCTTTTGTGGAGGAAATGAAGGTGTTTGAAAGAGAAAGACTAAATGGGCATTATGGTGTCACTGCATTTACCATTGGAAACACATTATCTTCTGTTCCATTTTTGCTGTTGATGTCATTGATCCCAGGAGCACTGGTTTATTACCTAGTTGGACTTCACCAAGGACATGAACATTTTGTGTACTTTATATTTATGCTTTTCACTTCCCTCTTCTTGGTTGAGGGTCTCATGATGATTGTTGCAAGCATGGTTCCCAATTTCTTGATGGGTATAATCGTTGGTTCGGGAATTTTGGGCATAATGATGTTAGATGGTGGGTTCTATAGGCTTCCAAGTGACATTCCTAAGCCATTTTGGAGATACCCTTTGCACTACATTTCCTTCCACAAGTATGCCTACCAAGGATTGTTCAAGAATGAATTTCAAGGTCTAACATTCCCTAGCAATCAAGTTGGAGCACACATGACAATTAGTGGTGAACATATTCTGAGACACATATGGCAAATGGAAGTTAATTATTCAAAGTGGGTGGATGTTGGTATCTTGGTAGGAATGGCAGTTCTATATCGAATTCTATTTATGGTTATCATCAAGAGCTTTGAGAAGTTGAAGTCTGTTGCTACAGCAATTAATTGTCCCCAAGCAAACTTTGGGTTCACCAAAGTGACAAGGAGCAGTGAAATTGATTAG 2037 0.4016 MSSILQPNASDCESNNSSKILPPLLEFDTSFEVELERIKSVETGKDGEEDQEEGVFLTWEDLWVTVSNGKNGRKPILQGLKGYAKPGKLLAIMGPSGCGKSTLLDALAGRLGSKTKQTGKILINGRKQALAYGASAYVTEDDTILTTLTVKEAVYYSANLQLPDSMSKSEKQERADFTIREMGLQDAINTRIGGWGSKGASGGQKRRVSICIEILTHPRLLFLDEPTSGLDSAASYHVMSRISNLNKKDGIQRTIIASIHQPSNEIFKLFPNLCLLSSGKTVYFGPTSAANKFFSSNGFPCSSLHSPSDHFVKTINKDFERDPEKGIAGGLSTEEAIHVLAKSYDSSEICHQVQNEIAQIKKRDSDAMDKKCHADFSTQCLILTRRSFLNMYREVGYYWLRLLIYGALALSLGTLFFDIGSSSESIQARGSLLVFVVTFLTFITVGGFPSFVEEMKVFERERLNGHYGVTAFTIGNTLSSVPFLLLMSLIPGALVYYLVGLHQGHEHFVYFIFMLFTSLFLVEGLMMIVASMVPNFLMGIIVGSGILGIMMLDGGFYRLPSDIPKPFWRYPLHYISFHKYAYQGLFKNEFQGLTFPSNQVGAHMTISGEHILRHIWQMEVNYSKWVDVGILVGMAVLYRILFMVIIKSFEKLKSVATAINCPQANFGFTKVTRSSEID 678
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma08g00666 678 Gene3D - 57 315 IPR027417 -
Gma08g00666 678 SMART AAA_5 86 279 IPR003593 -
Gma08g00666 678 Pfam ABC-2 type transporter 378 590 IPR013525 GO:0016020|GO:0140359
Gma08g00666 678 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 57 292 IPR027417 -
Gma08g00666 678 Pfam ABC-2 type transporter 260 359 IPR043926 GO:0140359
Gma08g00666 678 Pfam ABC transporter 79 228 IPR003439 GO:0005524
Gma08g00666 678 PANTHER XENOBIOTIC-TRANSPORTING ATPASE-RELATED 46 670 - -
Gma08g00666 678 PANTHER ABC TRANSPORTER G FAMILY MEMBER 11 46 670 - -
Gma08g00666 678 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 57 303 IPR003439 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma08g00666 Gma-Chr8 5524699 5528365 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma08g00666 87 344 Calmodulin-binding Proteins AT2G36910 26.621 2.13e-08 55.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma08g00666 K05681 - gmx:100792958 1335.86
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma08g00666 08 5524699 5528365 Gma08g00666 08 5524699 5528365 ECH