Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma08g00665 ATGGGAGAACAGAATGACATTACGCTGACATGGGAGAATTTGGAAGCTACTGTTACAAATGGAAAGAACCGAAAACTAATTCTTCATGGGCTTACAGGTTATGCCCAGCCAGGGAGACTTTTGGCTATAATTGGTCCTTCTGGCAGTGGCAAATCCACACTTCTTGATGCTTTAGCAGGAAGATTGACATCAAACATAAAGCAAACAGGGAAGATTCTAATCAATGGCCACAAACAAGAACTGGCTTATGGAACATCAGGCTATGTAACACAAGATGATGCTATGCTGTCATGTTTAACCGCTGGGGAAACTTTATACTACTCAGCTATGCTCCAATTTCCAAACACCATGTCTGTAGAAGAGAAGAAGGAACGAGCAGATATGACACTGAGAGAAATGGGTCTACAAGATGCCATCAACACAAGGGTTGGAGGGTGGAATTGTAAAGGCCTCAGTGGGGGACAAAGGAGGAGACTTAGCATTTGCATTGAGATTCTAACACACCCAAAACTCCTCTTCCTTGATGAACCAACTAGTGGACTTGATAGTGCAGCTTCCTATTATGTTATGAGTGGAATTGCAAATCTAATTCAAAGGGATGGAATTCAAAGGACTATTGTTGCTTCCGTCCATCAACCTAGCAGTGAAGTTTTCCAACTTTTCCATGACCTTTTTCTTCTCTCTTCCGGAGAGACAGTATATTTTGGTCCTGCCTCTGATGCAAATCAGTTTTTTGCTTCAAATGGTTTTCCTTGCCCACCTCTATATAATCCTTCTGATCACTACTTAAGGATCATAAACAAAGATTTCAACCAGGATGCTGATGAAGGAATTACTACTGAAGAAGCAACTAAAATCCTTGTCAATTCTTATAAATCTTCTGAATTTAGCAATCATGTTCAGAGTGAAATCGCAAAAAGTGAAACCGACTTCGGTGCATGTGGGAAGAAGAAGAAAATCCACGCTGCATTCATTACTCAGTGCCTAATCCTTATAAGAAGAGCTTCACTGCAAATCTATCGTGACACAAACAATTATTGGGCACGTTTAGTTGTCTTTATCTTCATATCTTTAAGCGTGGGCTCTATCTTTTATCACAGTGGCGGCCCGGATTTGCGATCGATTATGGATAGAGGATCGCTGCTTTGTTTTTTCGTTTCAGTTGTGACTTTCATGACACTTGTTGGTGGAATCTCTCCATTAATCGAGGAAATGAAGGTGTTTAAGCGAGAGAGACTGAATGGGCACTACGGTATTACGGCTTTTCTCATAAGCAACATATTCTCTGCTGTTCCTTACAATTTTTTGATGTCAATCATTCCGGGAGCTGTGGTTACTTATCTTTCTGGACTACATAAAGGAGTTGATAACTTTGTATTCCTTATTTCTGTTTTATTTGCTACCGTGACTTGGGTTGAGAGCCTTATGATGGTTGTTGGGAGTGTTTTTCCAAACTATGTCATGGGCGTGATCGTATGTGGAGGAATTGAAGGAGTCATGATTTTAACAAGTGGATTCTATCGACTTCCAAATGATCTTCCCAAACCAGTGTGGAAATTCCCTTTCTACTACATTTCCTTCCTCACCTATGCTTTCCAAGGACTGTTAAAAAATGAATTTGAAGACTTGCCATTTTCTTCGGAAGTTCTAGCTGACACTTGGCACGTGCAAATGGGTCACTCTAAGTGGGTTGATCTTGCTATCATGTTTGCCATGATTGTTCTGTATCGAGTTCTATTCTTGGCCATCAGTAAGTGCAAGGAGAAATCAAAACAAGTTAGTGTTGGCATTAAACCCGAAACTAAAATTTTCTCCAGAATCAACATCAGTGAACTCCAAATGAGGGGAATTGATGATCATAATGCTGTCTAA 1872 0.4033 MGEQNDITLTWENLEATVTNGKNRKLILHGLTGYAQPGRLLAIIGPSGSGKSTLLDALAGRLTSNIKQTGKILINGHKQELAYGTSGYVTQDDAMLSCLTAGETLYYSAMLQFPNTMSVEEKKERADMTLREMGLQDAINTRVGGWNCKGLSGGQRRRLSICIEILTHPKLLFLDEPTSGLDSAASYYVMSGIANLIQRDGIQRTIVASVHQPSSEVFQLFHDLFLLSSGETVYFGPASDANQFFASNGFPCPPLYNPSDHYLRIINKDFNQDADEGITTEEATKILVNSYKSSEFSNHVQSEIAKSETDFGACGKKKKIHAAFITQCLILIRRASLQIYRDTNNYWARLVVFIFISLSVGSIFYHSGGPDLRSIMDRGSLLCFFVSVVTFMTLVGGISPLIEEMKVFKRERLNGHYGITAFLISNIFSAVPYNFLMSIIPGAVVTYLSGLHKGVDNFVFLISVLFATVTWVESLMMVVGSVFPNYVMGVIVCGGIEGVMILTSGFYRLPNDLPKPVWKFPFYYISFLTYAFQGLLKNEFEDLPFSSEVLADTWHVQMGHSKWVDLAIMFAMIVLYRVLFLAISKCKEKSKQVSVGIKPETKIFSRINISELQMRGIDDHNAV 623
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma08g00665 623 Pfam ABC-2 type transporter 326 540 IPR013525 GO:0016020|GO:0140359
Gma08g00665 623 Pfam ABC transporter 29 179 IPR003439 GO:0005524
Gma08g00665 623 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 9 245 IPR027417 -
Gma08g00665 623 CDD ABCG_EPDR 7 236 - -
Gma08g00665 623 SMART AAA_5 37 239 IPR003593 -
Gma08g00665 623 ProSitePatterns ABC transporters family signature. 151 165 IPR017871 GO:0005524
Gma08g00665 623 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 9 254 IPR003439 GO:0005524
Gma08g00665 623 PANTHER XENOBIOTIC-TRANSPORTING ATPASE-RELATED 5 614 - -
Gma08g00665 623 Pfam ABC-2 type transporter 211 310 IPR043926 GO:0140359
Gma08g00665 623 PANTHER ABC TRANSPORTER G FAMILY MEMBER 11 5 614 - -
Gma08g00665 623 Gene3D - 7 324 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma08g00665 Gma-Chr8 5515100 5520422 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma08g00665 38 215 Calmodulin-binding Proteins AT2G36910 28.649 1.73e-11 65.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma08g00665 K05681 - gmx:100820615 1244.57