Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma08g00664 ATGATGAGTTCCATTCTCTGTCATCCTTTCAGAACTATAGATAGTTATGATGATGAAGCTTATGATGGCTCACAACAAGGACAAAGTGGCTTGGAGCTTGACGCCAATTTGGCCAAATGTTCAGAGGAGACAACCAGAGGAGAAGCTGTTCTAAATGTCGTTGCACAGCAAGGTGATGCTATTAAGTTAACAGAAATCAGTGAAAGTGTTCAAAGAGAGGACATAACAGGGACATGGGAGAATTTGTGGGTCACTGTTTCAAGTGGGAAGAACAAGAAGCCAATTCTGCAGGATCTTACGGGTTATGCACGGCCAGGAAGGATTCTTGCCATAATGGGCCCTTCAGGATGTGGAAAATCTACACTTCTTGATGCTTTAGCAGGAAGATTGAGCTCAAACATGAAGCAAACAGGGAAGATTCTAATCAATGGCCAGAAGCAAGCACTGGCCTATGGCACATCAGGCTATGTAACTCAAGATGATGCTATGCTGTCAACTTTAACCACTGGAGAAACTTTATACTACTCAGCTCAGCTCCAGTTTCCAGATTCCATGTCCATAGCAGAGAAGAAGGAACGCACAGATATGACATTGAGAGAAATGGGTCTGCAAGATGCCATCAACACAAGGGTTGGAGGGTGGGGTTCTAAAGGCCTCAGTGGGGGACAAAAGAGGAGACTTAGCATTTGCATTGAGATTCTAACACGCCCGAGACTTCTCTTCCTTGATGAACCAACTAGTGGACTTGACAGTGCAGCTTCATATTATGTCATGAGTAGAATTGCAACTCTAAATCAAAGGGACGGAATTCGAAGGACTATTGTTGCATCCATCCATCAGCCTAGCAGTGAAATTTTTGAACTTTTCCATGATCTTTGTCTTTTGTCTTCTGGTGAAACAGTATATTTTGGTCCAGCCTCTGATGCAAATCAGTTTTTTGCTTCAAATGGTTTCCCTTGCCCAACTCTCCACAATCCTTCTGATCACTACTTAAGGATCATAAACAAAGATTTTGAACAGGATGCTGAAAAAGGCCTTGGAACGGGAGTAACTTCAGAAAAAGCAATTGATACCCTTGTAAAGTCTTACAAGTCGTCTCAAATTAGAAAACAAGTTAAAAAGGAAGTGGATAAAATAGGTGAAAGTGATTCTGATGCAATAAGGAACCAGAGGATTCATGCTGCATTTCCCACTCAATGCCTTGTTCTTATAAGAAGAGCTTCCTTGCAGTTGTTTCGTGACATAAGCAATTACTGGTTACGTTTAATTGTCTTCATTGTAATAGCTATAAGCATCGGCTCTATCTTCTATGACATAGGCACAAGTAATGGATCTATTCAGGGGAGAGGTTCGCTGCTCATATTTTTTGTTTCAGTTCTGACTTTCATGACCCTTGTTGGTGGATTCTCTCCACTTTTGGAAGAAATGAAGGTATTTGAACGAGAGAGATTGAATGGGCACTATGGCGTCACGGCATTTCTCATAGGCAACATATTCTCTGCTGTTCCTTACATGCTATTGATCTCTCTTATTCCTGGTGGAATAGCATACTACCTTTGTGGGATGCACAAAGGACCAGAACGGTTCTTCTACTTCACTTCTTTGCTATTTGCCATAGTGATGTGGGTTGAGAGCCTTATGTTGGTTGTAGGGAGTATCTGCCCCAATTATGTAATAGGCATGTTCCTTGCTGGTGGAGTTGAAGGACTCATGATCTTAACAGGTGGATTCTATAGACTTCCAAATGATCTTCCCAAACCACTATGGAAATACCCTTTATACTATGTTTCCTTCCTCAAGTATGCATTCCAAGGATCATTCAAGAATGACTTTGAAGGCTTAACATTTTCTGTTGACCAAGATGGAGGAGGCATCATGAGTGGTAGAGAAGTACTAACTGACACATGGCATTTGGAAATGGGTTACTCTAAGTGGGTTGATCTTGCTATCATGTTTGGAATGATTGTTCTGTATCGAGTTTTGTTCTTGGTCATCACTAAGTGCAAGGAGAAAATGAAGCCTTTTCACTAG 2031 0.4146 MMSSILCHPFRTIDSYDDEAYDGSQQGQSGLELDANLAKCSEETTRGEAVLNVVAQQGDAIKLTEISESVQREDITGTWENLWVTVSSGKNKKPILQDLTGYARPGRILAIMGPSGCGKSTLLDALAGRLSSNMKQTGKILINGQKQALAYGTSGYVTQDDAMLSTLTTGETLYYSAQLQFPDSMSIAEKKERTDMTLREMGLQDAINTRVGGWGSKGLSGGQKRRLSICIEILTRPRLLFLDEPTSGLDSAASYYVMSRIATLNQRDGIRRTIVASIHQPSSEIFELFHDLCLLSSGETVYFGPASDANQFFASNGFPCPTLHNPSDHYLRIINKDFEQDAEKGLGTGVTSEKAIDTLVKSYKSSQIRKQVKKEVDKIGESDSDAIRNQRIHAAFPTQCLVLIRRASLQLFRDISNYWLRLIVFIVIAISIGSIFYDIGTSNGSIQGRGSLLIFFVSVLTFMTLVGGFSPLLEEMKVFERERLNGHYGVTAFLIGNIFSAVPYMLLISLIPGGIAYYLCGMHKGPERFFYFTSLLFAIVMWVESLMLVVGSICPNYVIGMFLAGGVEGLMILTGGFYRLPNDLPKPLWKYPLYYVSFLKYAFQGSFKNDFEGLTFSVDQDGGGIMSGREVLTDTWHLEMGYSKWVDLAIMFGMIVLYRVLFLVITKCKEKMKPFH 676
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma08g00664 676 CDD ABCG_EPDR 78 304 - -
Gma08g00664 676 Pfam ABC transporter 96 247 IPR003439 GO:0005524
Gma08g00664 676 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 70 322 IPR003439 GO:0005524
Gma08g00664 676 SMART AAA_5 105 298 IPR003593 -
Gma08g00664 676 ProSitePatterns ABC transporters family signature. 219 233 IPR017871 GO:0005524
Gma08g00664 676 Pfam ABC-2 type transporter 279 344 IPR043926 GO:0140359
Gma08g00664 676 Pfam ABC-2 type transporter 398 609 IPR013525 GO:0016020|GO:0140359
Gma08g00664 676 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 80 313 IPR027417 -
Gma08g00664 676 Gene3D - 78 403 IPR027417 -
Gma08g00664 676 PANTHER ABC TRANSPORTER G FAMILY MEMBER 11 1 676 - -
Gma08g00664 676 PANTHER WHITE-BROWN-COMPLEX ABC TRANSPORTER FAMILY PROTEIN 1 676 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma08g00664 Gma-Chr8 5497373 5503851 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma08g00664 67 283 Calmodulin-binding Proteins AT2G36910 30.837 4.22e-11 64.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma08g00664 K05681 - gmx:100792425 1343.95
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma08g00664 08 5497373 5503851 Gma08g00664 08 5497373 5503851 ECH