Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma08g00626 ATGGAAACGAGGATGTTGCGGCTTTCGATTCAACGAGTGAGGAAGTTGAACTTTCTGAGGCCTCAGATCTCTGCTTTGGGAAGGTCCCATTTGTCAACTGCTGCTGAACCATCTTCCAGTAAGAGCAATCCACCTAGGGTTCCAAATCTTATTGGGGGCAGTTTTGTTGACTCAAAAGCATCAACTGTCATTGATGTTATAAACCCGGCAAGTGCAACCCAAGAAGTTGTTTCACAAGTTCCTTTGTCGACGCATGAAGAGTTTAAGGCAGCTGTATCTGCAGCAAAGGAAGCATTTCCATCATGGCGTAACACTCCAATTACAACACGCCAACGTGTTATGTTGAAGCTTCAAGAGCTTATACGCAGAGATATGGATAAACTTGCTTTGAATGTGACCACTGAACAAGGAAAGACATTGAAAGATGCACAAGGAGATGTATTTCGTGGTTTAGAGGTGGTGGAACATGCTTGTGGAATGGCTACTCTACAAATGGGGGAGTATGTTTCCAATGTATCACATGGAATTGATACTTACAGCATTAGAGAACCACTTGGTGTTTGCGCTGGTATTTGTCCTTTCAACTTTCCTGCAATGATTCCCTTGTGGATGTTCCCTATGGCTGTTACCTGCGGTAATACCTTTGTTCTAAAACCATCAGAGAAAGACCCAGGTGCTTCTGTAATGCTTGCAGAATTGGCATTGGAGGCTGGTTTGCCTGAGGGTGTCTTAAATATAGTTCATGGAACCCATGATATTGTGAATGCTATTTGTGATGATGAAAACATCAAAGCCATATCTTTTGTTGGTTCAAATGTTGCTGGAATGCACATATATTCAAGAGCAGCAGCTAAAGGGAAACGTGTTCAGTCTAACATGGGAGCCAAAAATCATGCGATTGTCATGCCAGATGCAAATGTTGATGCTACTCTTAATGCTTTAGTTGCTTCTGGTTTTGGTGCTGCTGGACAAAGGTGTATGGCTCTCAGCACAGTTGTTTTTGTTGGTGGCTCAAAACCATGGGAGGATAAACTTTTAGAGCGTGCCAAAGCTCTAAAAGTAAATGCTGGAACTGAACCTGATACAGACCTTGGTCCGGTGATCAGCAAGCAGGCAAAGGAGAGAATACACAGATTAGTTCAATCTGGGGTTGAAAGTGGTGCCAGACTACTGCTTGATGGAAGAAATATAGTGGTCCCAGGATATGAATCTGGCAATTTTATTGGTCCAACCATCTTATCAGATATCAATGCCAACATGGAGTGCTACAAGGAGGAAATTTTTGGTCCAGTTCTTCTTTTCATGGAGGCTGATAGCTTGGAAGAAGCCATAAACATTATCAACAGTAACAAGTACGGAAATGGTGCTTCTATATTTACTACATCCGGTGTTGCTGCGAGGAAATTTCAGACTGAGATAGAGGCTGGACAGGTTGGCATCAATGTACCCATTCCAGTTCCTTTGCCCTTCTTCTCATTTACCGGCAACAAGGCATCGTTTGCCGGTGATCTCAACTTCTATGGCAAAGCAGGGGTTAACTTCTATACACAGATCAAGACAATAACACAGCAATGGAAGGATTCAACTGGTGGTAGCAGGATTAACTTGGCAATGCCAACCTCTCAAAAATAA 1632 0.4289 METRMLRLSIQRVRKLNFLRPQISALGRSHLSTAAEPSSSKSNPPRVPNLIGGSFVDSKASTVIDVINPASATQEVVSQVPLSTHEEFKAAVSAAKEAFPSWRNTPITTRQRVMLKLQELIRRDMDKLALNVTTEQGKTLKDAQGDVFRGLEVVEHACGMATLQMGEYVSNVSHGIDTYSIREPLGVCAGICPFNFPAMIPLWMFPMAVTCGNTFVLKPSEKDPGASVMLAELALEAGLPEGVLNIVHGTHDIVNAICDDENIKAISFVGSNVAGMHIYSRAAAKGKRVQSNMGAKNHAIVMPDANVDATLNALVASGFGAAGQRCMALSTVVFVGGSKPWEDKLLERAKALKVNAGTEPDTDLGPVISKQAKERIHRLVQSGVESGARLLLDGRNIVVPGYESGNFIGPTILSDINANMECYKEEIFGPVLLFMEADSLEEAINIINSNKYGNGASIFTTSGVAARKFQTEIEAGQVGINVPIPVPLPFFSFTGNKASFAGDLNFYGKAGVNFYTQIKTITQQWKDSTGGSRINLAMPTSQK 543
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma08g00626 543 ProSitePatterns Aldehyde dehydrogenases cysteine active site. 319 330 IPR016160 GO:0016491
Gma08g00626 543 PANTHER MALONATE-SEMIALDEHYDE DEHYDROGENASE 28 543 IPR010061 GO:0004491
Gma08g00626 543 CDD ALDH_F6_MMSDH 47 525 IPR010061 GO:0004491
Gma08g00626 543 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 67 502 IPR016162 GO:0016491
Gma08g00626 543 SUPERFAMILY ALDH-like 43 526 IPR016161 GO:0016491
Gma08g00626 543 PANTHER METHYLMALONATE-SEMIALDEHYDE DEHYDROGENASE 28 543 - -
Gma08g00626 543 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 294 494 IPR016163 GO:0016620
Gma08g00626 543 Pfam Aldehyde dehydrogenase family 55 521 IPR015590 GO:0016491
Gma08g00626 543 TIGRFAM MMSDH: methylmalonate-semialdehyde dehydrogenase (acylating) 49 525 IPR010061 GO:0004491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma08g00626 Gma-Chr8 5205229 5211510 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma08g00626 5 509 Aldehyde Dehydrogenase Gene Family AT2G14170 80.198 0.0 834
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma08g00626 K00140 - gmx:100811544 1056.59
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma07g01786 07 38995898 39002681 Gma08g00626 08 5205229 5211510 GST