Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma08g00611 ATGGCTTCCTCGGAGATCGAGGTGGTTTCATCATCATCATCGGTCTCCAAACCCAACAACGACCAGCCTCCAATCCTCGACGTTTTCACCGCCTCTGCTCACGGCGACTTCAACAAATTGAGAACCTTCGTCGAACAAGACGGTGCCTCCGTCTCTCTTCCCGATTTTAGCGGCTATTACGCTCTTCAGTGGGCCTCGCTCAACAACTTTCACGACATTGCGCACTATCTCATTCAGCATGGGGCGGATGTCAATGCTAAAGACAACATGCAACAAACGGCATTGCACTGGGCAGCGGTTCACGGTTCAACTCTAGCTGCTGATGTGCTTGTGGAGAACGGTGCTCGGGTCGAAGCTGCAGATGTAAATGGATACCGGGCAGTTCATGTTGCTGCACAATTTGGACAGACAGCTTTCTTAAATCATATTGTAGTAAAGTACCATGCTGATTTTGATGTGCCTGATAATGATGGAAGGAGTCCTCTTCATTGGGCTGCATATAAGGGATTTGCTGACACAGTAAGATTGCTTCTATTTAGAGATGCAAGTCAAGGAAGACAAGATAAAGATGGTTGTACACCGTTGCACTGGGCTGCATTAAGGGGAAATGCAGAGGCATGTGCTGTGCTTGTACATGCAGGCACAAAAGAAGAACTGATGATGAAGGACAATGCTGGGAACACACCTGTACAGCTTGCATATGATAAAGGTCATCGGCATGTCGCTCCTTTCCTTTCAAATCAACAACGGGCTCATAGCAACTACTGGAAAGGGAAACTGTGTAGTGGGATAGTGACAGATATTGGTTATGCTCCCATCTTATTCTGTACTATAATCTTTCTCTCAATCCTCTTCATCAACTCAGTTGTTGCAGCTCCTAACCTTAAAAAGATTACTGCTGTTGTTGGACTTTGGGCATGGACAGCGCTTTCTTCGGCTGTTGGTTCCCTGATTATGTTCTATAAGTGCAGTAGTAAAGATCCTGGTTATATAAAACGACTGGGAGAATTGGGTACTCAAAGTGATACAGAGGATCCTTTATTGAATATTGATCTGAATAGTTCCTCTGTTTGGATGGGAAATTGGTCTCAACTTTGCCCTACCTGCAAGATAATAAGACCTGTCCGATCTAAGCATTGCCCAACTTGTAAGCGATGTGTGGAACAGTTTGACCACCACTGTCCATGGATATCTAACTGTGTTGGGAAGAGGAACAAAAGGGATTTCTTTATTTTTATCTGCCTGGGAACTTTGACTTCTTCCCTTTCTGGTGCCGTTGCAGTTCAAAGAATTTGTACATCTAAACCAGCATTACTGGCAGGAGaaacatggatccattatgtgttagtaagacatctaggtttagttgtgtttttGGTGATGGATGCTGTTGTTTTTGTTGCGACTACGACATTAACGATAACCCAGGCTTCCATGATAGCTCGAAATGTGACCACAAATGAACTAGCAAATTCCTCCCGTTATGATTATCTTCGTGGTCCTGATGGGCGGTTCAGAAACCCATACAACCACGGTTGTTGGAAGAATTGTGCTGACTTCTTTTTTCTCGGCTATACAAATGATGATGAGATTGCTTGGCCTCCATTACAGCAGACTTGCCCCTGGTTTGTTTTTTCTCCCTGTGTCCCTTCTTCTTCTTCCTCCCCTTTCAAATCTGAGATGTCCTCTATCTTTCCACCTGAGTTGCTCCACCATTACATCAATGGTCCGATGAGGAAATACTTCAACACTAAGTTGCGGTGCGCTCATGAAAGTACCCATAGTTGCTGTGAAGCACGTCTCGGAAATCCAATCATACGAACAGTGATGCAAAGGAGTAGTATCGTCTCGTCGTGA 1857 0.4378 MASSEIEVVSSSSSVSKPNNDQPPILDVFTASAHGDFNKLRTFVEQDGASVSLPDFSGYYALQWASLNNFHDIAHYLIQHGADVNAKDNMQQTALHWAAVHGSTLAADVLVENGARVEAADVNGYRAVHVAAQFGQTAFLNHIVVKYHADFDVPDNDGRSPLHWAAYKGFADTVRLLLFRDASQGRQDKDGCTPLHWAALRGNAEACAVLVHAGTKEELMMKDNAGNTPVQLAYDKGHRHVAPFLSNQQRAHSNYWKGKLCSGIVTDIGYAPILFCTIIFLSILFINSVVAAPNLKKITAVVGLWAWTALSSAVGSLIMFYKCSSKDPGYIKRLGELGTQSDTEDPLLNIDLNSSSVWMGNWSQLCPTCKIIRPVRSKHCPTCKRCVEQFDHHCPWISNCVGKRNKRDFFIFICLGTLTSSLSGAVAVQRICTSKPALLAGETWIHYVLVRHLGLVVFLVMDAVVFVATTTLTITQASMIARNVTTNELANSSRYDYLRGPDGRFRNPYNHGCWKNCADFFFLGYTNDDEIAWPPLQQTCPWFVFSPCVPSSSSSPFKSEMSSIFPPELLHHYINGPMRKYFNTKLRCAHESTHSCCEARLGNPIIRTVMQRSSIVSS 618
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma08g00611 618 ProSiteProfiles Ankyrin repeat region circular profile. 90 121 - -
Gma08g00611 618 Gene3D - 142 257 IPR036770 -
Gma08g00611 618 ProSiteProfiles Ankyrin repeat profile. 123 156 IPR002110 GO:0005515
Gma08g00611 618 ProSiteProfiles Ankyrin repeat profile. 90 122 IPR002110 GO:0005515
Gma08g00611 618 ProSiteProfiles Ankyrin repeat region circular profile. 157 183 - -
Gma08g00611 618 ProSiteProfiles Ankyrin repeat region circular profile. 57 89 - -
Gma08g00611 618 Pfam Ankyrin repeats (3 copies) 121 185 IPR002110 GO:0005515
Gma08g00611 618 Pfam Ankyrin repeats (3 copies) 33 120 IPR002110 GO:0005515
Gma08g00611 618 ProSiteProfiles Ankyrin repeat profile. 190 222 IPR002110 GO:0005515
Gma08g00611 618 ProSiteProfiles DHHC domain profile. 364 414 - -
Gma08g00611 618 ProSiteProfiles Ankyrin repeat profile. 57 89 IPR002110 GO:0005515
Gma08g00611 618 Gene3D - 25 141 IPR036770 -
Gma08g00611 618 ProSiteProfiles Ankyrin repeat profile. 157 189 IPR002110 GO:0005515
Gma08g00611 618 Pfam DHHC palmitoyltransferase 364 491 IPR001594 GO:0016409
Gma08g00611 618 Pfam Ankyrin repeat 190 223 IPR002110 GO:0005515
Gma08g00611 618 MobiDBLite consensus disorder prediction 1 22 - -
Gma08g00611 618 PANTHER - 3 531 - -
Gma08g00611 618 PANTHER PROTEIN S-ACYLTRANSFERASE 24 3 531 - -
Gma08g00611 618 SMART ANK_2a 190 219 IPR002110 GO:0005515
Gma08g00611 618 SMART ANK_2a 57 86 IPR002110 GO:0005515
Gma08g00611 618 SMART ANK_2a 123 153 IPR002110 GO:0005515
Gma08g00611 618 SMART ANK_2a 225 255 IPR002110 GO:0005515
Gma08g00611 618 SMART ANK_2a 157 186 IPR002110 GO:0005515
Gma08g00611 618 SMART ANK_2a 90 119 IPR002110 GO:0005515
Gma08g00611 618 SUPERFAMILY Ankyrin repeat 29 247 IPR036770 -
Gma08g00611 618 ProSiteProfiles Ankyrin repeat region circular profile. 190 214 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma08g00611 Gma-Chr8 5010231 5021486 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma08g00611 31 205 Ion Channels AT2G25600 30.899 3.29e-11 64.7
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma07g01798 07 39125843 39136885 Gma08g00611 08 5010231 5021486 GST