Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma08g00609 ATGGTGCATGGGGGAGTTGTGGTTTTGGATATTGCTGAATTAGTTTCTTATGGAGATTTCATCCATCAGAGGACAACTCCTCCAGACAGTATCTCTCAAGGAACCTTGCTGGGGAATCATAATAACTATGTCTTCAAGGCATGCCAAGAAGCCAAAAAGACTGGGAAACGTTATAAACATTCTCAACCTCAAGACCACATCATAGCTGAAAGGAAGCGGCGAGAGAAGCTCAGCCAGCGGTTCATTGCTTTATCTGCCCTTGTTCCTGGACTACAGAAGTGTGCTACTAATAACAGACGGATAAAGCTTCTGTTCTTGGAGATGCTATCAAATACTTGA 339 0.4336 MVHGGVVVLDIAELVSYGDFIHQRTTPPDSISQGTLLGNHNNYVFKACQEAKKTGKRYKHSQPQDHIIAERKRREKLSQRFIALSALVPGLQKCATNNRRIKLLFLEMLSNT 112
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma08g00609 112 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 61 112 IPR011598 GO:0046983
Gma08g00609 112 PANTHER SYMBIOTIC AMMONIUM TRANSPORTER 25 93 - -
Gma08g00609 112 PANTHER BHLH TRANSCRIPTION FACTOR 25 93 - -
Gma08g00609 112 Gene3D - 48 111 IPR036638 GO:0046983
Gma08g00609 112 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 54 93 IPR036638 GO:0046983
Gma08g00609 112 Pfam Helix-loop-helix DNA-binding domain 64 95 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma08g00609 Gma-Chr8 4999583 5000991 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma08g00609 61 93 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G37850 84.848 1.05e-12 60.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Gma08g00609 HLH 7.3e-05 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma08g00609 - - gmx:106799528 180.259