Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma08g00599 ATGGTTTTTTTCTGTATCCTTCTCCTCTTCTTAAACTCTAGGATCTGCACAGAAATGGTTTTTCAAATAAAAAGGGATATTCTCATGCATGCCTTCTGGTGTTCTTCCTTACTCAGTTTCTACATGGTAGTAGTAGCTCATGGCGTTGAAAGCGATATATCCTGCTTAAAATCAATTAAGAACACCTTAGAAGACCCACATAACAAATTATCAAGTTGGAAGAACTTCAACAACAAAACCAACGGTTTCATATGCGATTTCGTTGGCGTTGAATGCTGGCACCCTGGCGAGAATAAAGTGCTACATCTCAACCTCACAAACATGGGTCTGAAGGGTGAGTTTCCACGTGATCTTCGGGATTGCCCTTCATTGACATCCTTAAACCTTTCACACAACGAGCTCACAGGACCCATCCCATCTGATATATCCACATTACTCCCTTATGCTACTTCCATTGACCTCTCAAATAACAAGTTTAATGGGGAAATTCCACCAAGTTTGGGTAACTGCAGTTACCTGACTTCTCTTAGACTTGATAACAACATGTTAAGCGGTCATATCCCACAAGAACTTGGGCAGCTTCAAAGGATTAGAAACATCTCTTTTGCCAACAATAATTTATCAGGGCCGGTTCCTCTGTTCCAACCTGGGTTAACTTGTGTTGATTGTTATGCCAATAACAGAGAACTTTGTGGAGGGCCTTTGCCACCATGTGGGTCAAGCGATGATTTCACTGAAACATTCAAGAAGGGCCTTGCTATTGGCTATGCTTTTTCGGTGACTTCTGTTATTGTCATTTATATCTCCTACTTTGCACCTTGGGAACAATCAGAATCAAAGCATAAAACAAATTACAAGGCTAAAGAATTCCGCAAATATATTTGCTCCATCGCAGGGAGGAAGACACCAACTGAACCTCATACCGAACAAGAATTGCAACCTCTGCAGTTGCAAGAGAAAGCTATCAAAGAGATTTCTGTAGTGACAGACAGAATGAAGTCAACAATGAGGCTCAACGAAGTCAGAGATGCAACTGATTGCTTTTCCATAGACAATGCCATTGGGATGGGGAAAATTGGAATAATGTACAAGGGAAGGTTACCAAATGGTTGGAACCTTGCGATCAAGAGACTATTCGATTCTAAACTATTTAAGAGGCAATTTCTTTTAGAAATAAGAATTTTGGGCAAGTACAGACACAAAAATATAGTTCCCCTGCTTGGGTTCTGTGTGGAAGGAAAGGAAAGGATTCTGGTATACCAATACATGTCAAATGGAAGGCTTTCAAAATGGTTGCATCCTTTAGAAAGTGAAGTTACATTGAAATGGCCTCAGAGGATCAAAATAGCTCTTGGGGTAGCAAGAGGCTTATCCTGGCTCCATCATATCTGTGATTTGCATGTTGTGCATCGTAATATAAGTTCGGGATGTGTCTTGCTAGATAAGAATTTTGAACCCAAAATATCCAATTTTGGAAATGCCAAGTTTATCAATCCCAACATTGAGGACAGTGCAAGCACAACATTTTATGTAAGCGACGGGAAGAAGGATGTCTATGACTTTGGTAGTTTGATTTTTGAGCTAATCACAGGGAAAACATTTAACGAGTTGTCGCGTTCATCATACAATGCTACTAACCTGTCTGGCAACCCATCGAATTTTTATGATGCAATTGAGGAATCTCTCATTGGGGAAGGTTTTGAAAATGAGGTCTACACTCTCATCAAAGTAGCATGTAAGTGTGTTAAGCCTTTCCCAGATGAAAGACCAACGATGCTTGAAGTTTATAACTATATGATCGATATATGGGGAGAGCGACATAGAATAAGTGATGGTTCTGACACACTCAACGTATCTAGTTCTTCTACTAGTGTAGATGAAATTGTTGAGCTATGA 1896 0.3998 MVFFCILLLFLNSRICTEMVFQIKRDILMHAFWCSSLLSFYMVVVAHGVESDISCLKSIKNTLEDPHNKLSSWKNFNNKTNGFICDFVGVECWHPGENKVLHLNLTNMGLKGEFPRDLRDCPSLTSLNLSHNELTGPIPSDISTLLPYATSIDLSNNKFNGEIPPSLGNCSYLTSLRLDNNMLSGHIPQELGQLQRIRNISFANNNLSGPVPLFQPGLTCVDCYANNRELCGGPLPPCGSSDDFTETFKKGLAIGYAFSVTSVIVIYISYFAPWEQSESKHKTNYKAKEFRKYICSIAGRKTPTEPHTEQELQPLQLQEKAIKEISVVTDRMKSTMRLNEVRDATDCFSIDNAIGMGKIGIMYKGRLPNGWNLAIKRLFDSKLFKRQFLLEIRILGKYRHKNIVPLLGFCVEGKERILVYQYMSNGRLSKWLHPLESEVTLKWPQRIKIALGVARGLSWLHHICDLHVVHRNISSGCVLLDKNFEPKISNFGNAKFINPNIEDSASTTFYVSDGKKDVYDFGSLIFELITGKTFNELSRSSYNATNLSGNPSNFYDAIEESLIGEGFENEVYTLIKVACKCVKPFPDERPTMLEVYNYMIDIWGERHRISDGSDTLNVSSSSTSVDEIVEL 631
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma08g00599 631 Gene3D Transferase(Phosphotransferase) domain 1 423 617 - -
Gma08g00599 631 Gene3D Phosphorylase Kinase; domain 1 309 422 - -
Gma08g00599 631 PANTHER PROTEIN KINASE, PLANT-TYPE, PUTATIVE-RELATED 25 600 - -
Gma08g00599 631 PANTHER RECEPTOR-LIKE PROTEIN 55 25 600 - -
Gma08g00599 631 Pfam Protein tyrosine and serine/threonine kinase 350 597 IPR001245 GO:0004672|GO:0006468
Gma08g00599 631 Gene3D Ribonuclease Inhibitor 49 238 IPR032675 -
Gma08g00599 631 SUPERFAMILY L domain-like 49 221 - -
Gma08g00599 631 Pfam Leucine rich repeat N-terminal domain 50 93 IPR013210 -
Gma08g00599 631 ProSiteProfiles Protein kinase domain profile. 348 599 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma08g00599 631 SUPERFAMILY Protein kinase-like (PK-like) 333 598 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma08g00599 Gma-Chr8 4929747 4932433 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma08g00599 50 602 Receptor kinase-like Gene Family AT3G28450 35.813 2.29e-108 337
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-Xa Gma08g00599 PK_Tyr_Ser-Thr 2.7e-25 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma08g00599 - - gmx:102664092 1264.98
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma08g00599 08 4929747 4932433 Gma13g02242 13 37295355 37295885 PCT
Gma13g02242 13 37295355 37295885 Gma08g00599 08 4929747 4932433 PCT